fix: Sync CI and pre-commit configurations

- Add explicit src/ directory to pre-commit ruff checks
- Add ruff format check to CI pipeline
- Fix trailing whitespace in ci.yml
- Ensure consistent linting between local and CI environments

Author: ivolnistov

.github/workflows/ci.yml

@@ -28,9 +28,12 @@ jobs:
     - name: Install dependencies
       run: uv sync
 
-    - name: Run Ruff
+    - name: Run Ruff Linter
       run: uv run ruff check src/
 
+    - name: Run Ruff Formatter (check only)
+      run: uv run ruff format --check src/
+
     - name: Run MyPy
       run: uv run mypy src/youtrack_rocket_mcp --ignore-missing-imports
 

.pre-commit-config.yaml

@@ -10,14 +10,17 @@ repos:
         entry: uv run ruff check
         language: system
         types: [python]
-        args: [--fix]
+        args: [--fix, src/]
+        pass_filenames: false
         require_serial: true
 
       - id: ruff-format
         name: ruff (format)
         entry: uv run ruff format
         language: system
         types: [python]
+        args: [src/]
+        pass_filenames: false
         require_serial: true
 
       # MyPy via uv