fix issue #1

Author: GeoBosh

Diff for: DESCRIPTION

@@ -1,8 +1,7 @@
 Package: mixAR
 Type: Package
 Title: Mixture Autoregressive Models
-Version: 0.22.7.9000
-Date: 2022-05-05
+Version: 0.22.8.9000
 Authors@R: c( person(given = c("Georgi", "N."), 
                      family = "Boshnakov", 
                      role = c("aut", "cre"), 
@@ -26,8 +25,8 @@ Imports: stats, graphics, utils, stats4, BB, combinat, timeDate,
         permute, mvtnorm
 Suggests: fma, testthat, covr
 RdMacros: Rdpack
-URL: https://geobosh.github.io/mixAR/ (website),
-        https://github.com/GeoBosh/mixAR/ (devel)
+URL: https://geobosh.github.io/mixAR/ (doc),
+     https://github.com/GeoBosh/mixAR/ (devel)
 BugReports: https://github.com/GeoBosh/mixAR/issues
 Collate: raggedCoef.R raggedCoefS.R mixComp.R mixAR.R mixARcalc.R
         mixutil.R dist.R predict.R mix_se.R obs_info_matrix.R

Diff for: NEWS.md

@@ -1,3 +1,17 @@
+# mixAR 0.22.8.9000 (CRAN)
+
+- fixed a typo in a `stop()` string 
+  (fixes issue #1, reported by @beliavski).
+
+
+# mixAR 0.22.8 (CRAN)
+
+- fixed 'Lost braces' NOTE on CRAN.
+
+- fixed "Documented arguments not in \usage in Rd file 'mixAR-internal.Rd':"
+  NOTE on CRAN.
+
+
 # mixAR 0.22.7 (CRAN)
 
 - fixed CRAN warning "`\item` in `\describe` must have non-empty label" in a

Diff for: R/fit_mixARreg.R

@@ -2,7 +2,7 @@
 ## It has been automatically generated from mixAR.org.
 
 fit_mixARreg <- function(x, y, mixARmodel, EMinit, ...){
-    stop("There is currently no default for this funciton")
+    stop("There is currently no default for this function")
 }
 setGeneric("fit_mixARreg")
 

Diff for: R/mixAR.R

@@ -867,7 +867,7 @@ setMethod("fit_mixAR", signature(x = "ANY", model = "MixARGaussian", init = "Mix
           })
 
 # build_mixAR <- function(x, ncomp = 2, pmax = 2, ...){
-#                                      # stop("There is currently no default for this funciton")
+#                                      # stop("There is currently no default for this function")
 #     if(ncomp < 2)
 #         ncomp <- 2
 #
@@ -1288,7 +1288,7 @@ setMethod("show_diff", signature(model1="MixARGaussian", model2="MixARgen"),
               invisible("")
 	  })
 
-                                                                  # 2012-11-02 new arg. 'drop'
+# 2012-11-02 new arg. 'drop'
 parameters <- function(model, namesflag = FALSE, drop = character(0)){
     coef(model)
 }

Diff for: man/MixAR-class.Rd

@@ -61,7 +61,7 @@
 %%  ~Make other sections like Warning with \section{Warning }{....} ~
 
 \seealso{
-  code{\link{mixAR}},
+  \code{\link{mixAR}},
   classes \code{"\linkS4class{MixARGaussian}"},
           \code{"\linkS4class{MixARgen}"}
 }

Diff for: man/mixAR-internal.Rd

@@ -19,15 +19,8 @@
 param_score_stdt(x, nu)
 }
 \arguments{
-  \item{nu}{~~ TODO: describe this argument. ~~}
-  \item{p}{~~ TODO: describe this argument. ~~}
-  \item{value}{~~ TODO: describe this argument. ~~}
   \item{x}{~~ TODO: describe this argument. ~~}
-  \item{tau}{~~ TODO: describe this argument. ~~}
-  \item{etk}{~~ TODO: describe this argument. ~~}
-  \item{parscore}{~~ TODO: describe this argument. ~~}
-  \item{sigma}{~~ TODO: describe this argument. ~~}
-  \item{logpdf}{~~ TODO: describe this argument. ~~}
+  \item{nu}{~~ TODO: describe this argument. ~~}
 }
 \details{
   These are not to be called by the user (or in some cases are just

Diff for: man/mixAR-package.Rd

@@ -2,6 +2,16 @@
 \alias{mixAR-package}
 %\alias{mixAR}
 \docType{package}
+
+\concept{mixture autoregressive model}
+\concept{MAR model}
+\concept{TMAR model}
+\concept{mixture autoregression}
+
+\concept{non-gaussian time series}
+\concept{asymmetry in time series}
+\concept{multi-modality in time series}
+
 % attaching the package is not necessary for this file but it ensures
 % that Sexpr's using functions from the package will work also in other
 % Rd files, without them needing to attach the package. This is
@@ -236,10 +246,25 @@ Maintainer: \Sexpr[stage=build]{pd$Maintainer}
 
   \insertRef{WongLi2001b}{mixAR}
 }
-% \seealso{
-% ~~ Optional links to other man pages, e.g. ~~
-% ~~ \code{\link[<pkg>:<pkg>-package]{<pkg>}} ~~
-% }
+\seealso{
+  fit several types of mixAR models:
+  \code{\link{fit_mixAR}}, \code{\link{bayes_mixAR}},
+  \code{\link{fit_mixARreg}},
+  \code{\link{mixSARfit}};
+
+  Predictive distributions and summaries:
+  \code{\link{mix_pdf}}, \code{\link{mix_cdf}}, \code{\link{mix_qf}},
+  \code{\link{mix_location}},
+  \code{\link{mix_variance}},
+  \code{\link{mix_central_moment}},
+  \code{\link{mix_moment}},
+  \code{\link{mix_kurtosis}},
+  \code{\link{mix_ekurtosis}}
+
+  multi-step prediction:
+  \code{\link{multiStep_dist}}
+
+}
 \examples{
 ## object 'exampleModels' contains a number of models for examples and testing
 names(exampleModels)