Hi Fabian,
I have an error message when run:
run_atac("ChrAccR_analysis", "bamFilenameFull", sampleAnnot, genome="hg38", sampleIdCol="sampleId", regionSets=regionSetList)
Error in (function (cond) :
error in evaluating the argument 'x' in selecting a method for function 'getMatrixSet': there is no package called 'JASPAR2018'
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Do I need to install 'JASPAR2018'? I have 'JASPAR2016' and 'JASPAR2022'. Thank you so much!
Hi Fabian,
I have an error message when run:
run_atac("ChrAccR_analysis", "bamFilenameFull", sampleAnnot, genome="hg38", sampleIdCol="sampleId", regionSets=regionSetList)Error in (function (cond) :
error in evaluating the argument 'x' in selecting a method for function 'getMatrixSet': there is no package called 'JASPAR2018'
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Do I need to install 'JASPAR2018'? I have 'JASPAR2016' and 'JASPAR2022'. Thank you so much!