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articulated messages about skipping qc if already exist
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seedVoxelCorrelation.sh

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -266,7 +266,7 @@ function roi_qc()
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gunzip -f $seedQCdir/${roi}_overlay_${suffix}.nii.gz
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done
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else
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echo "$roi QC already exists"
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echo "Under/overlay niftis already exist for ${roi}! Skipping..."
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fi
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}
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@@ -547,7 +547,7 @@ for i in $(cat "$roiOutDir"/seeds.txt); do
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if [ ! -f $seedQCOutdir/${i}_axial.png ] || [ ! -f $seedQCOutdir/${i}_coronal.png ] || [ ! -f $seedQCOutdir/${i}_sagittal.png ]; then
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echo "${i}" >> "$roiOutDir"/seeds_forQC.txt
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else
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echo "$i QC already exists"
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echo "png images for QC already exist for $i! Skipping..."
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fi
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done
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