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add file checking test to compcor_global
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.circleci/config.yml

Lines changed: 10 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -120,11 +120,11 @@ jobs:
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--compcor
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mv /tmp/data/ds005/derivatives/rsOut /tmp/data/ds005/derivatives/rsOutCompcor
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- run:
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name: Check outputs
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name: Check compcor outputs
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command: |
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mkdir -p /tmp/ds005/test
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find /tmp/data/ds005/derivatives/rsOutCompcor -type f | sed s+/tmp/data/ds005/derivatives/rsOutCompcor++ | sort > /tmp/ds005/test/outputs.out
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diff /tmp/src/RestingState/.circleci/ds005_compcor.txt /tmp/ds005/test/outputs.out
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find /tmp/data/ds005/derivatives/rsOutCompcor -type f | sed s+/tmp/data/ds005/derivatives/rsOutCompcor++ | sort > /tmp/ds005/test/outputs-compcor.out
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diff /tmp/src/RestingState/.circleci/ds005_compcor.txt /tmp/ds005/test/outputs-compcor.out
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exit $?
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- store_artifacts:
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path: /tmp/data/ds005/derivatives/rsOutCompcor
@@ -140,6 +140,13 @@ jobs:
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--roiList=/data/derivatives/data/roi_list.txt \
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--compcor_global
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mv /tmp/data/ds005/derivatives/rsOut /tmp/data/ds005/derivatives/rsOutCompcorGlobal
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- run:
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name: Check compcor_global outputs
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command: |
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mkdir -p /tmp/ds005/test
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find /tmp/data/ds005/derivatives/rsOutCompcorGlobal -type f | sed s+/tmp/data/ds005/derivatives/rsOutCompcorGlobal++ | sort > /tmp/ds005/test/outputs-compcor_global.out
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diff /tmp/src/RestingState/.circleci/ds005_compcor_global.txt /tmp/ds005/test/outputs-compcor_global.out
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exit $?
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- store_artifacts:
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path: /tmp/data/ds005/derivatives/rsOutCompcorGlobal
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