Skip to content

Analysis does not populate file_core.file_source #39

Open
@hannes-ucsc

Description

@hannes-ucsc

The spec requires Analysis to set the provenance.submitter_id on project-level matrices. The use of provenance.submitter_id was a hack to work around the lack (at the time the spec was written) of a suitable schema property to identify the origin of a file.

We now have file_core.file_source and DCP/2 Analysis should populate it, not only for matrices but in all …_file entities it emits. It should be set to DCP/2 Analysis, one of the valid enum values for that property.

To ensure a smooth transition, Analysis should continue to populate provenance.submitter_id for backwards compatibility.

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions