From 231016137f32a4e010b5533e9f787eb3de29c900 Mon Sep 17 00:00:00 2001 From: Arsenios Chatzigeorgiou <49944135+arschat@users.noreply.github.com> Date: Tue, 11 Feb 2025 15:23:37 +0000 Subject: [PATCH 1/2] Added institute --- docs/jsonBrowser/type.md | 1 + json_schema/type/biomaterial/cell_suspension.json | 6 ++++++ json_schema/update_log.csv | 1 + 3 files changed, 8 insertions(+) diff --git a/docs/jsonBrowser/type.md b/docs/jsonBrowser/type.md index 77630e94b..05f9f7728 100644 --- a/docs/jsonBrowser/type.md +++ b/docs/jsonBrowser/type.md @@ -373,6 +373,7 @@ genus_species | The scientific binomial name for the species of the suspension. selected_cell_types | The cell type(s) selected to be present in the suspension. | array | no | [See module cell_type_ontology](module.md#cell-type-ontology) | Selected cell type(s) | | estimated_cell_count | Estimated number of cells in the suspension. | integer | no | | Estimated cell count | | 1; 2100 plate_based_sequencing | Fields specific for plate-based sequencing experiments. | object | no | [See module plate_based_sequencing](module.md#plate-based-sequencing) | Plate-based sequencing | | +institute | Institute where the biomaterial was processed. | string | no | | Institute | | Wellcome Sanger Institute; University of Zurich; University of Pennsylvania ## Cell line _Information about the cell line or cell culture biomaterial._ diff --git a/json_schema/type/biomaterial/cell_suspension.json b/json_schema/type/biomaterial/cell_suspension.json index 99c5ec00e..d4cbee97c 100644 --- a/json_schema/type/biomaterial/cell_suspension.json +++ b/json_schema/type/biomaterial/cell_suspension.json @@ -83,6 +83,12 @@ "type": "object", "$ref": "module/process/sequencing/plate_based_sequencing.json", "user_friendly": "Plate-based sequencing" + }, + "institute": { + "description": "Institute where the biomaterial was processed.", + "type": "string", + "user_friendly": "Institute", + "example": "Wellcome Sanger Institute; University of Zurich; University of Pennsylvania" } } } diff --git a/json_schema/update_log.csv b/json_schema/update_log.csv index 3231ff199..d8d9da667 100644 --- a/json_schema/update_log.csv +++ b/json_schema/update_log.csv @@ -1 +1,2 @@ Schema,Change type,Change message,Version,Date +type/biomaterial/cell_suspension.json,minor,"Added institute in cell_suspension.Issue1608",, \ No newline at end of file From 2200bce08af0ba2c07318b1fd6242a359911161e Mon Sep 17 00:00:00 2001 From: Arsenios Chatzigeorgiou <49944135+arschat@users.noreply.github.com> Date: Thu, 20 Feb 2025 22:23:07 +0000 Subject: [PATCH 2/2] Updated update_log.csv --- json_schema/update_log.csv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/json_schema/update_log.csv b/json_schema/update_log.csv index d8d9da667..19f94c77f 100644 --- a/json_schema/update_log.csv +++ b/json_schema/update_log.csv @@ -1,2 +1,2 @@ Schema,Change type,Change message,Version,Date -type/biomaterial/cell_suspension.json,minor,"Added institute in cell_suspension.Issue1608",, \ No newline at end of file +type/biomaterial/cell_suspension,minor,"Added institute in cell_suspension.Issue1608",, \ No newline at end of file