neuroshapes/shapes/neurosciencegraph/datashapes/morphology/reconstruction/schema.json at 02e9002ec8fa0bd8822dcb1d9fa214382f19035b · INCF/neuroshapes · GitHub

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{
  "@context": [
    "https://incf.github.io/neuroshapes/contexts/schema.json",
    {
      "this": "https://neuroshapes.org/dash/reconstruction/shapes/"
    }
  ],
  "@id": "https://neuroshapes.org/dash/reconstruction",
  "@type": "nxv:Schema",
  "imports": [
    "https://neuroshapes.org/commons/activity",
    "https://neuroshapes.org/commons/typedlabeledontologyterm"
  ],
  "prov:wasDerivedFrom": "https://github.com/INCF/neuroshapes/blob/v0.3.15/modules/morphology/src/main/resources/schemas/neurosciencegraph/morphology/reconstruction/v0.1.1.json",
  "shapes": [
    {
      "@id": "this:ReconstructionShape",
      "@type": "sh:NodeShape",
      "label": "Reconstruction activities description.",
      "targetClass": ["nsg:Reconstruction", "nsg:NeuronMorphologyReconstruction"],
      "nodeKind": "sh:BlankNodeOrIRI",
      "and": [
        {
          "node": "https://neuroshapes.org/commons/activity/shapes/ActivityShape"
        },
        {
          "property": [
            {
              "path": "nsg:objectiveType",
              "name": "Objective type",
              "description": "Type of objective that was used for the reconstruction such as dry, oil or water.",
              "node": "https://neuroshapes.org/commons/typedlabeledontologyterm/shapes/ObjectiveTypeOntologyTermShape",
              "maxCount": 1
            },
            {
              "path": "nsg:objectiveMagnification",
              "name": "Objective magnification",
              "description": "Objective magnification.",
              "datatype": "xsd:string",
              "maxCount": 1
            },
            {
              "path": "nsg:compressionCorrection",
              "name": "Reconstruction compression correction",
              "description": "Reconstruction compression corrected refers to the correction applied to the cell reconstruction, expected value: x1.25 in Z.",
              "datatype": "xsd:string",
              "maxCount": 1
            },
            {
              "path": "prov:used",
              "description": "The labeled cell used for the reconstruction activity",
              "class": "nsg:LabeledCell",
              "minCount": 1,
              "maxCount": 1
            },
            {
              "path": "prov:generated",
              "description": "The reconstructed cell generated",
              "class": "nsg:ReconstructedCell",
              "minCount": 1,
              "maxCount": 1
            },
            {
              "path": "nsg:lowMagnificationImage",
              "name": "Low Magnification Image",
              "description": "Image taken at low magnification for anatomical context.",
              "datatype": "xsd:string",
              "maxCount": 1,
              "comment": "File path or URL to the low magnification image."
            }
          ]
        }
      ]
    }
  ]
}