Upgraded all macOS and Linux builds to use PETSc 3.23; clean up

Author: TidbitSoftware

externalpackages/petsc/install-3.23-linux-static.sh

@@ -0,0 +1,57 @@
+#!/bin/bash
+set -eu
+
+
+## Constants
+#
+VER="3.23.6"
+
+PETSC_DIR="${ISSM_DIR}/externalpackages/petsc/src" # DO NOT CHANGE THIS
+PREFIX="${ISSM_DIR}/externalpackages/petsc/install" # Set to location where external package should be installed
+
+# Download source
+${ISSM_DIR}/scripts/DownloadExternalPackage.sh "https://web.cels.anl.gov/projects/petsc/download/release-snapshots/petsc-${VER}.tar.gz" "petsc-${VER}.tar.gz"
+
+# Unpack source
+tar -zxvf petsc-${VER}.tar.gz
+
+# Cleanup
+rm -rf ${PREFIX} ${PETSC_DIR}
+mkdir -p ${PETSC_DIR}
+
+# Move source to $PETSC_DIR
+mv petsc-${VER}/* ${PETSC_DIR}
+rm -rf petsc-${VER}
+
+# Configure
+#
+# NOTE:
+# - Cannot use --with-fpic option when compiling static libs,
+#
+#		Cannot determine compiler PIC flags if shared libraries is turned off
+#		Either run using --with-shared-libraries or --with-pic=0 and supply the
+#		compiler PIC flag via CFLAGS, CXXXFLAGS, and FCFLAGS
+#
+cd ${PETSC_DIR}
+./configure \
+	--prefix="${PREFIX}" \
+	--PETSC_DIR="${PETSC_DIR}" \
+	--with-shared-libraries=0 \
+	--CFLAGS="-fPIC" \
+	--CXXFLAGS="-fPIC" \
+	--FFLAGS="-fPIC" \
+	--with-debugging=0 \
+	--with-valgrind=0 \
+	--with-x=0 \
+	--with-ssl=0 \
+	--download-fblaslapack=1 \
+	--download-metis=1 \
+	--download-mpich=1 \
+	--download-mumps=1 \
+	--download-parmetis=1 \
+	--download-scalapack=1 \
+	--download-zlib=1
+
+# Compile and install
+make
+make install

externalpackages/petsc/install-3.23-linux.sh

@@ -0,0 +1,52 @@
+#!/bin/bash
+set -eu
+
+
+## Constants
+#
+VER="3.23.6"
+
+PETSC_DIR="${ISSM_DIR}/externalpackages/petsc/src" # DO NOT CHANGE THIS
+PREFIX="${ISSM_DIR}/externalpackages/petsc/install" # Set to location where external package should be installed
+
+# Environment
+if [ -z ${LDFLAGS+x} ]; then
+	LDFLAGS=""
+fi
+
+# Download source
+${ISSM_DIR}/scripts/DownloadExternalPackage.sh "https://web.cels.anl.gov/projects/petsc/download/release-snapshots/petsc-${VER}.tar.gz" "petsc-${VER}.tar.gz"
+
+# Unpack source
+tar -zxvf petsc-${VER}.tar.gz
+
+# Cleanup
+rm -rf ${PREFIX} ${PETSC_DIR}
+mkdir -p ${PETSC_DIR}
+
+# Move source to $PETSC_DIR
+mv petsc-${VER}/* ${PETSC_DIR}
+rm -rf petsc-${VER}
+
+# Configure
+cd ${PETSC_DIR}
+./configure \
+	--prefix="${PREFIX}" \
+	--PETSC_DIR="${PETSC_DIR}" \
+	--LDFLAGS="${LDFLAGS}" \
+	--with-debugging=0 \
+	--with-valgrind=0 \
+	--with-x=0 \
+	--with-ssl=0 \
+	--with-pic=1 \
+	--download-fblaslapack=1 \
+	--download-metis=1 \
+	--download-mpich=1 \
+	--download-mumps=1 \
+	--download-parmetis=1 \
+	--download-scalapack=1 \
+	--download-zlib=1
+
+# Compile and install
+make
+make install

externalpackages/petsc/install-3.23-mac-static.sh

@@ -0,0 +1,62 @@
+#!/bin/bash
+set -eu
+
+
+## Constants
+#
+VER="3.23.6"
+
+PETSC_DIR="${ISSM_DIR}/externalpackages/petsc/src" # DO NOT CHANGE THIS
+PREFIX="${ISSM_DIR}/externalpackages/petsc/install" # Set to location where external package should be installed
+
+# Download source
+${ISSM_DIR}/scripts/DownloadExternalPackage.sh "https://web.cels.anl.gov/projects/petsc/download/release-snapshots/petsc-${VER}.tar.gz" "petsc-${VER}.tar.gz"
+
+# Unpack source
+tar -zxvf petsc-${VER}.tar.gz
+
+# Cleanup
+rm -rf ${PREFIX} ${PETSC_DIR}
+mkdir -p ${PETSC_DIR}
+
+# Move source to $PETSC_DIR
+mv petsc-${VER}/* ${PETSC_DIR}
+rm -rf petsc-${VER}
+
+# Configure
+#
+# NOTE:
+# - Cannot use --with-fpic option when compiling static libs,
+#
+#		Cannot determine compiler PIC flags if shared libraries is turned off
+#		Either run using --with-shared-libraries or --with-pic=0 and supply the
+#		compiler PIC flag via CFLAGS, CXXXFLAGS, and FCFLAGS
+#
+cd ${PETSC_DIR}
+./configure \
+	--prefix="${PREFIX}" \
+	--PETSC_DIR="${PETSC_DIR}" \
+	--with-shared-libraries=0 \
+	--CFLAGS="-fPIC" \
+	--CXXFLAGS="-fPIC" \
+	--FFLAGS="-fPIC" \
+	--with-debugging=0 \
+	--with-valgrind=0 \
+	--with-x=0 \
+	--with-ssl=0 \
+	--download-fblaslapack=1 \
+	--download-metis=1 \
+	--download-mpich=1 \
+	--download-mumps=1 \
+	--download-parmetis=1 \
+	--download-scalapack=1 \
+	--download-zlib=1
+
+# Compile and install
+make
+make install
+
+# Need to make symlinks from libmpich* to libmpi*
+ln -s ${PREFIX}/lib/libmpi.a ${PREFIX}/lib/libmpich.a
+ln -s ${PREFIX}/lib/libmpicxx.a ${PREFIX}/lib/libmpichcxx.a
+ln -s ${PREFIX}/lib/libmpifort.a ${PREFIX}/lib/libmpichf90.a

jenkins/eis-daskhub-python-modules

@@ -30,7 +30,7 @@ ISSM_CONFIG='\
 EXTERNALPACKAGES="
 	autotools	install-linux.sh
 	cmake		install.sh
-	petsc		install-3.22-linux.sh
+	petsc		install-3.23-linux.sh
 	triangle	install-linux.sh
 	m1qn3		install-linux.sh
 	semic		install.sh

jenkins/eis-smce-binaries

@@ -31,7 +31,7 @@ ISSM_CONFIG='\
 EXTERNALPACKAGES="
 	autotools	install-linux.sh
 	cmake		install.sh
-	petsc		install-3.22-linux.sh
+	petsc		install-3.23-linux.sh
 	triangle	install-linux.sh
 	m1qn3		install-linux.sh
 	semic		install.sh

jenkins/github-linux-basic-codeql

@@ -32,7 +32,7 @@ ISSM_CONFIG='\
 EXTERNALPACKAGES="
 	autotools	install-mac.sh
 	cmake		install.sh
-	petsc		install-3.22-mac.sh
+	petsc		install-3.23-mac.sh
 	triangle	install-mac.sh
 	m1qn3		install-mac.sh
 	semic		install.sh

jenkins/github_linux_basic

@@ -47,7 +47,7 @@ ISSM_CONFIG='\
 EXTERNALPACKAGES="
 	autotools	install-mac.sh
 	cmake		install.sh
-	petsc		install-3.22-mac-static.sh
+	petsc		install-3.23-mac-static.sh
 	boost		install-1.7-mac-static.sh
 	dakota		install-6.2-mac-static.sh
 	chaco		install-mac.sh

jenkins/mac-intel-basic

@@ -47,7 +47,7 @@ ISSM_CONFIG='\
 EXTERNALPACKAGES="
 	autotools	install-mac.sh
 	cmake		install.sh
-	petsc		install-3.22-mac-static.sh
+	petsc		install-3.23-mac-static.sh
 	boost		install-1.7-mac-static.sh
 	dakota		install-6.2-mac-static.sh
 	chaco		install-mac.sh