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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -105,10 +105,10 @@ namespace illumina { namespace interop { namespace model { namespace metrics {
105105 q_collapsed_metric (const uint_t lane,
106106 const uint_t tile,
107107 const uint_t cycle,
108- const uint_t q20,
109- const uint_t q30,
110- const uint_t total,
111- const uint_t median_qscore) :
108+ const uint64_t q20,
109+ const uint64_t q30,
110+ const uint64_t total,
111+ const uint64_t median_qscore) :
112112 metric_base::base_cycle_metric (lane, tile, cycle),
113113 m_q20 (q20),
114114 m_q30 (q30),
@@ -135,31 +135,31 @@ namespace illumina { namespace interop { namespace model { namespace metrics {
135135 *
136136 * @return number of q20 clusters
137137 */
138- uint_t q20 ()const
138+ uint64_t q20 ()const
139139 {
140140 return m_q20;
141141 }
142142 /* * Number of Q30 clusters
143143 *
144144 * @return number of q30 clusters
145145 */
146- uint_t q30 ()const
146+ uint64_t q30 ()const
147147 {
148148 return m_q30;
149149 }
150150 /* * Total number of q-scored clusters
151151 *
152152 * @return total number of q-scored clusters
153153 */
154- uint_t total ()const
154+ uint64_t total ()const
155155 {
156156 return m_total;
157157 }
158158 /* * Median q-score for tile
159159 *
160160 * @return median q-score
161161 */
162- uint_t median_qscore ()const
162+ uint64_t median_qscore ()const
163163 {
164164 return m_median_qscore;
165165 }
@@ -261,10 +261,10 @@ namespace illumina { namespace interop { namespace model { namespace metrics {
261261 static const char * suffix (){return " 2030" ;}
262262
263263 private:
264- uint_t m_q20;
265- uint_t m_q30;
266- uint_t m_total;
267- uint_t m_median_qscore;
264+ uint64_t m_q20;
265+ uint64_t m_q30;
266+ uint64_t m_total;
267+ uint64_t m_median_qscore;
268268 ulong_t m_cumulative_q20;
269269 ulong_t m_cumulative_q30;
270270 ulong_t m_cumulative_total;
Original file line number Diff line number Diff line change @@ -198,10 +198,10 @@ namespace illumina { namespace interop { namespace logic { namespace metric
198198 collapsed.set_version (model::metrics::q_collapsed_metric::LATEST_VERSION );
199199 for (const_iterator beg = metric_set.begin (), end = metric_set.end ();beg != end;++beg)
200200 {
201- const uint_t q20 = beg->total_over_qscore (q20_idx);
202- const uint_t q30 = beg->total_over_qscore (q30_idx);
203- const uint_t total = beg->sum_qscore ();
204- const uint_t median = beg->median (metric_set.get_bins ());
201+ const uint64_t q20 = beg->total_over_qscore (q20_idx);
202+ const uint64_t q30 = beg->total_over_qscore (q30_idx);
203+ const uint64_t total = beg->sum_qscore ();
204+ const uint64_t median = beg->median (metric_set.get_bins ());
205205 collapsed.insert (model::metrics::q_collapsed_metric (beg->lane (),
206206 beg->tile (),
207207 beg->cycle (),
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