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README.md

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@@ -17,21 +17,21 @@ We could only share the PPI images created from the original h5 radar files (and
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For running a demo with our data (radial velocity images) follow the bellow steps:
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### Run Demo
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1- Download the train and test data from [this link](https://drive.google.com/file/d/1Hrb1F7lzfVPqyzXJq-WQ46zSClk7ks0F/view?usp=sharing)
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2- Open 'UNET_Soaring birds_model_f.ipynb'
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3- Copy the zip folder of the data to the colab files area and run the code training the UNET model with our data
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4- Run 'evaluate_performance_f.ipynb' for performance evalution with the best epoch from the previous code
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1- Download the train and test data from [this link](https://drive.google.com/file/d/1Hrb1F7lzfVPqyzXJq-WQ46zSClk7ks0F/view?usp=sharing)<br/>
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2- Open 'UNET_Soaring birds_model_f.ipynb'<br/>
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3- Copy the zip folder of the data to the colab files area and run the code<br/>
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4- Run 'evaluate_performance_f.ipynb' for performance evalution with the best epoch from the previous code<br/>
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For prediciting your data with our trainned model,follow the bellow steps:
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1- Create from your h5 radar files PPI images with 'creating_ppi.R' (in the 'prepare_data' folder). The model uses 2 previous images of each image we want to predict so you have to have consecutive images.
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2- Download our best epoch from [this link](https://drive.google.com/file/d/1hnWelWk0rSyUfAXgGJMQa_PCyip97_sc/view?usp=sharing)
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3- Run 'evaluate_performance_f.ipynb'
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1- Create from your h5 radar files PPI images with 'creating_ppi.R' (in the 'prepare_data' folder). The model uses 2 previous images for each image we want to detect flocks in, so you have to have consecutive images.<br/>
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2- Download our best epoch from [this link](https://drive.google.com/file/d/1hnWelWk0rSyUfAXgGJMQa_PCyip97_sc/view?usp=sharing)<br/>
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3- Run 'evaluate_performance_f.ipynb'<br/>
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In case you want to add more data for the training follow the bellow steps:
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1- Create PPI images with 'creating_ppi.R' in the 'prepare_data' folder.
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2- You need to tag the images. We used labal- studio https://labelstud.io/
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3- In case you did used label-studio, the program creates a few images if you tag the same image a few times (for adding/ correcting previous tag) and in addition, the mask name do not get the name of the origin image. The code prepare_img_mask.py in the 'prepare_data' folder concatanate masks of the same image and in addition, conact the image and mask names by their file names.
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1- Create PPI images with 'creating_ppi.R' in the 'prepare_data' folder.<br/>
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2- You need to tag the images. We used labal- studio https://labelstud.io/<br/>
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3- In case you did used label-studio, the program creates a few images if you tag the same image a few times (for adding/ correcting previous tag) and in addition, the mask name do not get the name of the origin image. The code prepare_img_mask.py in the 'prepare_data' folder concatanate masks of the same image and in addition, conact the image and mask names by their file names.<br/>

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