Changes launch scripts

Author: youennmereljourdan

postprocess.sh

@@ -5,9 +5,11 @@
 #OAR -E ./log/postprocess_log_%jobid%.stderr
 #OAR -q production
 
+TAG="fmri-confs-runner"
+
 BASE="/home/ymerel/empenn_group_storage/private/ymerel"
 RESULTS="$BASE/auditory_276"
 
-pip install -r requirements.txt
-python postprocess.py --results $RESULTS
-
+5k-setup-docker -t
+docker build . -t $TAG
+docker run -u root -v "$RESULTS:/results" $TAG python postprocess.py --results "/results"

run_configs.sh

@@ -6,7 +6,7 @@
 #OAR -E ./log/run_config_log_%jobid%.stderr
 #OAR -q production
 
-TAG="fmri-confs-runner"c
+TAG="fmri-confs-runner"
 
 BASE="/home/ymerel/empenn_group_storage/private/ymerel"
 DATA="$BASE/data/auditory"
@@ -27,3 +27,5 @@ else
     docker run -u root -v "$DATA:/data" -v "$RESULTS:/results" -v "$WORK:/work" -v "$CONFIGS:/configs" $TAG python run.py --configs "/configs/$CONF" --data /data/data_desc.json
 fi
 
+sudo-g5k chown -R ymerel:empenn $RESULTS
+