force main environment yaml for CI

Author: Jack-Hayes

.github/workflows/ci.yml

@@ -1,4 +1,4 @@
-name: CI (conda + mamba via setup-miniconda)
+name: CI
 
 on:
   push:
@@ -9,38 +9,32 @@ on:
 jobs:
   test:
     runs-on: ubuntu-latest
+    defaults:
+      run:
+        shell: bash -l {0} # Use login shell for all steps
+
     steps:
-      - uses: actions/checkout@v4
+      - name: Checkout repository
+        uses: actions/checkout@v4
 
-      - name: Set up Miniconda (with conda-forge channel)
-        uses: conda-incubator/setup-miniconda@v2
+      - name: Set up Mambaforge
+        uses: conda-incubator/setup-miniconda@v3
         with:
           python-version: "3.11"
-          channels: "conda-forge,defaults"
+          environment-file: environment.yml # Use the main environment file
+          mamba-version: "*"
+          activate-environment: planetquery
           auto-update-conda: true
-          # do not pin mamba-version to avoid "package not found" errors
-
-      - name: Create CI conda env with mamba
-        shell: bash -l {0}
-        run: |
-          # create an environment with mamba (conda-forge)
-          mamba create -n ci-env -y -c conda-forge \
-            python=3.11 ipywidgets ipyleaflet pytest ruff pip \
-            numpy pandas xarray rioxarray rasterio geopandas shapely matplotlib
-          source "$(conda info --base)/etc/profile.d/conda.sh"
-          conda activate ci-env
-          python -m pip install -e .
-
-      - name: Lint (ruff)
-        shell: bash -l {0}
-        run: |
-          source "$(conda info --base)/etc/profile.d/conda.sh"
-          conda activate ci-env
-          python -m ruff check .
-
-      - name: Run tests (pytest)
-        shell: bash -l {0}
-        run: |
-          source "$(conda info --base)/etc/profile.d/conda.sh"
-          conda activate ci-env
-          pytest -q
+          channel-priority: "strict"
+
+      - name: Install test dependencies
+        run: mamba install -y pytest ruff
+
+      - name: Install local package
+        run: python -m pip install -e . --no-deps
+
+      - name: Lint with Ruff
+        run: ruff check .
+
+      - name: Run tests with Pytest
+        run: pytest

binder/postBuild

@@ -0,0 +1,7 @@
+#!/bin/bash
+
+# binder/postBuild
+# runs after the environment is built
+
+# Install the src/planetquery package in editable mode
+pip install -e .

pyproject.toml

@@ -11,3 +11,6 @@ license = {text = "MIT"}
 line-length = 100
 select = ["E", "F", "I", "W", "C", "N", "Q"]
 extend-ignore = ["E203", "W503"]
+
+[tool.setuptools.packages.find]
+where = ["src"]