SEPHIROTH/pyproject.toml at main · Juanpacol/SEPHIROTH · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
[tool.pytest.ini_options]
asyncio_mode = "auto"
testpaths = ["tests"]
pythonpath = [".", "platform"]

[tool.coverage.run]
source = [
    "intelligence/agents",
    "intelligence/llm",
    "intelligence/mcp",
    "intelligence/evaluation",
    "intelligence/nlp/__init__.py",
    "intelligence/nlp/timeline_extractor.py",
    "data/rag",
    "data/schemas",
    "data/embeddings",
    "data/vectors",
    "platform/api",
    "platform/auth",
    "platform/core",
]
omit = [
    "*/__pycache__/*",
    "*/tests/*",
    "data/embeddings/build_artifact.py",
]

[tool.coverage.report]
fail_under = 87
show_missing = true
exclude_lines = [
    "pragma: no cover",
    "if TYPE_CHECKING:",
    "raise NotImplementedError",
]

[tool.ruff]
line-length = 110
exclude = [
    "references",
    "intelligence/medical-imaging",
    "intelligence/nlp/ner",
    "intelligence/nlp/pipeline",
    "intelligence/nlp/preprocessing",
    "platform/frontend",
    ".venv",
]

[tool.ruff.lint]
select = ["E", "F", "I"]

[tool.ruff.lint.isort]
# `platform/` is on PYTHONPATH rather than a normal src layout (see
# CLAUDE.md), so ruff can't infer these first-party roots on its own.
known-first-party = ["api", "auth", "core", "data", "intelligence", "tests"]

[tool.bandit]
exclude_dirs = [
    "references",
    "intelligence/medical-imaging",
    "intelligence/nlp/ner",
    "intelligence/nlp/pipeline",
    "intelligence/nlp/preprocessing",
    "platform/frontend",
    ".venv",
    "tests",
]