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conversions.jl
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# conversion routines between different sparse and dense storage formats
"""
sparse(x::DenseCuMatrix; fmt=:csc)
sparse(I::CuVector, J::CuVector, V::CuVector, [m, n]; fmt=:csc)
Return a sparse cuda matrix, with type determined by `fmt`.
Possible formats are :csc, :csr, :bsr, and :coo.
"""
function SparseArrays.sparse(x::DenseCuMatrix; fmt=:csc)
if fmt == :csc
return CuSparseMatrixCSC(x)
elseif fmt == :csr
return CuSparseMatrixCSR(x)
elseif fmt == :bsr
return CuSparseMatrixBSR(x)
elseif fmt == :coo
return CuSparseMatrixCOO(x)
else
error("Format :$fmt not available, use :csc, :csr, :bsr or :coo.")
end
end
SparseArrays.sparse(I::CuVector, J::CuVector, V::CuVector; kws...) =
sparse(I, J, V, maximum(I), maximum(J); kws...)
SparseArrays.sparse(I::CuVector, J::CuVector, V::CuVector, m, n; kws...) =
sparse(Cint.(I), Cint.(J), V, m, n; kws...)
function SparseArrays.sparse(I::CuVector{Cint}, J::CuVector{Cint}, V::CuVector{Tv}, m, n;
fmt=:csc, sorted::Bool=false) where Tv
coo = CuSparseMatrixCOO{Tv}(I, J, V, (m, n))
# The COO format is assumed to be sorted by row.
if !sorted
coo = sort_rows(coo)
end
if fmt == :csc
return CuSparseMatrixCSC(coo)
elseif fmt == :csr
return CuSparseMatrixCSR(coo)
elseif fmt == :coo
return coo
else
error("Format :$fmt not available, use :csc, :csr, or :coo.")
end
end
function sort_rows(coo::CuSparseMatrixCOO{Tv,Ti}) where {Tv <: BlasFloat,Ti}
m,n = size(coo)
perm = CuArray{Ti}(undef, nnz(coo))
cusparseCreateIdentityPermutation(handle(), nnz(coo), perm)
sorted_rowInd = copy(coo.rowInd)
sorted_colInd = copy(coo.colInd)
function bufferSize()
out = Ref{Csize_t}()
cusparseXcoosort_bufferSizeExt(handle(), m, n, nnz(coo), coo.rowInd,
coo.colInd, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseXcoosortByRow(handle(), m, n, nnz(coo), sorted_rowInd, sorted_colInd, perm, buffer)
end
sorted_nzVal = similar(coo.nzVal)
let spvec = CuSparseVector(perm, sorted_nzVal, nnz(coo))
if version() >= v"11.1.1"
gather!(spvec, nonzeros(coo), 'Z')
else
gthr!(spvec, nonzeros(coo), 'Z')
end
end
CUDA.unsafe_free!(perm)
CuSparseMatrixCOO{Tv}(sorted_rowInd, sorted_colInd, sorted_nzVal, size(coo))
end
function sort_rows(coo::CuSparseMatrixCOO{Tv,Ti}) where {Tv,Ti}
perm = sortperm(coo.rowInd)
sorted_rowInd = coo.rowInd[perm]
sorted_colInd = coo.colInd[perm]
sorted_nzVal = coo.nzVal[perm]
CUDA.unsafe_free!(perm)
CuSparseMatrixCOO{Tv}(sorted_rowInd, sorted_colInd, sorted_nzVal, size(coo))
end
## CSR to CSC
function CuSparseMatrixCSC{T}(S::Transpose{T, <:CuSparseMatrixCSR{T}}) where T
csr = parent(S)
return CuSparseMatrixCSC{T}(csr.rowPtr, csr.colVal, csr.nzVal, size(csr))
end
function CuSparseMatrixCSR{T}(S::Transpose{T, <:CuSparseMatrixCSC{T}}) where T
csc = parent(S)
return CuSparseMatrixCSR{T}(csc.colPtr, csc.rowVal, csc.nzVal, size(csc))
end
function CuSparseMatrixCSC{T}(S::Adjoint{T, <:CuSparseMatrixCSR{T}}) where {T <: Real}
csr = parent(S)
return CuSparseMatrixCSC{T}(csr.rowPtr, csr.colVal, csr.nzVal, size(csr))
end
function CuSparseMatrixCSR{T}(S::Adjoint{T, <:CuSparseMatrixCSC{T}}) where {T <: Real}
csc = parent(S)
return CuSparseMatrixCSR{T}(csc.colPtr, csc.rowVal, csc.nzVal, size(csc))
end
function CuSparseMatrixCSC{T}(S::Adjoint{T, <:CuSparseMatrixCSR{T}}) where {T <: Complex}
csr = parent(S)
return CuSparseMatrixCSC{T}(csr.rowPtr, csr.colVal, conj.(csr.nzVal), size(csr))
end
function CuSparseMatrixCSR{T}(S::Adjoint{T, <:CuSparseMatrixCSC{T}}) where {T <: Complex}
csc = parent(S)
return CuSparseMatrixCSR{T}(csc.colPtr, csc.rowVal, conj.(csc.nzVal), size(csc))
end
for SparseMatrixType in [:CuSparseMatrixCSC, :CuSparseMatrixCSR]
@eval begin
$SparseMatrixType(S::Diagonal) = $SparseMatrixType(cu(S))
$SparseMatrixType(S::Diagonal{T, <:CuArray}) where T = $SparseMatrixType{T}(S)
$SparseMatrixType{Tv}(S::Diagonal{T, <:CuArray}) where {Tv, T} = $SparseMatrixType{Tv, Cint}(S)
function $SparseMatrixType{Tv, Ti}(S::Diagonal{T, <:CuArray}) where {Tv, Ti, T}
m = size(S, 1)
return $SparseMatrixType{Tv, Ti}(CuVector(1:(m+1)), CuVector(1:m), Tv.(S.diag), (m, m))
end
end
end
# by flipping rows and columns, we can use that to get CSC to CSR too
for elty in (Float32, Float64, ComplexF32, ComplexF64)
@eval begin
CuSparseMatrixCSC{$elty}(csr::CuSparseMatrixCSR{$elty, Cint}; inda::SparseChar='O') =
CuSparseMatrixCSC{$elty, Cint}(csr; inda)
CuSparseMatrixCSR{$elty}(csc::CuSparseMatrixCSC{$elty, Cint}; inda::SparseChar='O') =
CuSparseMatrixCSR{$elty, Cint}(csc; inda)
function CuSparseMatrixCSC{$elty, Cint}(csr::CuSparseMatrixCSR{$elty, Cint}; inda::SparseChar='O')
m,n = size(csr)
colPtr = CUDA.zeros(Cint, n+1)
rowVal = CUDA.zeros(Cint, nnz(csr))
nzVal = CUDA.zeros($elty, nnz(csr))
# TODO: algorithm configuratibility?
function bufferSize()
out = Ref{Csize_t}(1)
cusparseCsr2cscEx2_bufferSize(handle(), m, n, nnz(csr), nonzeros(csr),
csr.rowPtr, csr.colVal, nzVal, colPtr, rowVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseCsr2cscEx2(handle(), m, n, nnz(csr), nonzeros(csr),
csr.rowPtr, csr.colVal, nzVal, colPtr, rowVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, buffer)
end
CuSparseMatrixCSC{$elty, Cint}(colPtr,rowVal,nzVal,size(csr))
end
function CuSparseMatrixCSR{$elty, Cint}(csc::CuSparseMatrixCSC{$elty, Cint}; inda::SparseChar='O')
m,n = size(csc)
rowPtr = CUDA.zeros(Cint,m+1)
colVal = CUDA.zeros(Cint,nnz(csc))
nzVal = CUDA.zeros($elty,nnz(csc))
# TODO: algorithm configuratibility?
function bufferSize()
out = Ref{Csize_t}(1)
cusparseCsr2cscEx2_bufferSize(handle(), n, m, nnz(csc), nonzeros(csc),
csc.colPtr, rowvals(csc), nzVal, rowPtr, colVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseCsr2cscEx2(handle(), n, m, nnz(csc), nonzeros(csc),
csc.colPtr, rowvals(csc), nzVal, rowPtr, colVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, buffer)
end
CuSparseMatrixCSR{$elty, Cint}(rowPtr,colVal,nzVal,size(csc))
end
end
end
# implement Float16 conversions using wider types
# TODO: Float16 is sometimes natively supported
for (elty, welty) in ((:Float16, :Float32),
(:ComplexF16, :ComplexF32))
@eval begin
CuSparseMatrixCSC{$elty}(csr::CuSparseMatrixCSR{$elty, Cint}; inda::SparseChar='O') =
CuSparseMatrixCSC{$elty, Cint}(csr; inda)
CuSparseMatrixCSR{$elty}(csc::CuSparseMatrixCSC{$elty, Cint}; inda::SparseChar='O') =
CuSparseMatrixCSR{$elty, Cint}(csc; inda)
function CuSparseMatrixCSC{$elty, Cint}(csr::CuSparseMatrixCSR{$elty, Cint}; inda::SparseChar='O')
m,n = size(csr)
colPtr = CUDA.zeros(Cint, n+1)
rowVal = CUDA.zeros(Cint, nnz(csr))
nzVal = CUDA.zeros($elty, nnz(csr))
# TODO: algorithm configuratibility?
if $elty == Float16 #broken for ComplexF16?
function bufferSize()
out = Ref{Csize_t}(1)
cusparseCsr2cscEx2_bufferSize(handle(), m, n, nnz(csr), nonzeros(csr),
csr.rowPtr, csr.colVal, nzVal, colPtr, rowVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseCsr2cscEx2(handle(), m, n, nnz(csr), nonzeros(csr),
csr.rowPtr, csr.colVal, nzVal, colPtr, rowVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, buffer)
end
return CuSparseMatrixCSC{$elty, Cint}(colPtr,rowVal,nzVal,size(csr))
else
wide_csr = CuSparseMatrixCSR{$welty, Cint}(csr.rowPtr, csr.colVal, convert(CuVector{$welty}, nonzeros(csr)), size(csr))
wide_csc = CuSparseMatrixCSC{$welty, Cint}(wide_csr)
return CuSparseMatrixCSC{$elty, Cint}(wide_csc.colPtr, wide_csc.rowVal, convert(CuVector{$elty}, nonzeros(wide_csc)), size(wide_csc))
end
end
function CuSparseMatrixCSR{$elty, Cint}(csc::CuSparseMatrixCSC{$elty, Cint}; inda::SparseChar='O')
m,n = size(csc)
rowPtr = CUDA.zeros(Cint,m+1)
colVal = CUDA.zeros(Cint,nnz(csc))
nzVal = CUDA.zeros($elty,nnz(csc))
if $elty == Float16 #broken for ComplexF16?
# TODO: algorithm configuratibility?
function bufferSize()
out = Ref{Csize_t}(1)
cusparseCsr2cscEx2_bufferSize(handle(), n, m, nnz(csc), nonzeros(csc),
csc.colPtr, rowvals(csc), nzVal, rowPtr, colVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseCsr2cscEx2(handle(), n, m, nnz(csc), nonzeros(csc),
csc.colPtr, rowvals(csc), nzVal, rowPtr, colVal,
$elty, CUSPARSE_ACTION_NUMERIC, inda,
CUSPARSE_CSR2CSC_ALG1, buffer)
end
return CuSparseMatrixCSR{$elty, Cint}(rowPtr,colVal,nzVal,size(csc))
else
wide_csc = CuSparseMatrixCSC{$welty, Cint}(csc.colPtr, csc.rowVal, convert(CuVector{$welty}, nonzeros(csc)), size(csc))
wide_csr = CuSparseMatrixCSR{$welty, Cint}(wide_csc)
return CuSparseMatrixCSR{$elty, Cint}(wide_csr.rowPtr, wide_csr.colVal, convert(CuVector{$elty}, nonzeros(wide_csr)), size(wide_csr))
end
end
end
end
# implement Int conversions using reinterpreted Float
for (elty, felty) in ((:Int16, :Float16),
(:Int32, :Float32),
(:Int64, :Float64),
(:Int128, :ComplexF64))
@eval begin
CuSparseMatrixCSR{$elty}(csc::CuSparseMatrixCSC{$elty, Cint}) =
CuSparseMatrixCSR{$elty, Cint}(csc)
CuSparseMatrixCSC{$elty}(csr::CuSparseMatrixCSR{$elty, Cint}) =
CuSparseMatrixCSC{$elty, Cint}(csr)
function CuSparseMatrixCSR{$elty, Cint}(csc::CuSparseMatrixCSC{$elty, Cint})
csc_compat = CuSparseMatrixCSC{$felty, Cint}(
csc.colPtr,
csc.rowVal,
reinterpret($felty, csc.nzVal),
size(csc)
)
csr_compat = CuSparseMatrixCSR(csc_compat)
CuSparseMatrixCSR{$elty, Cint}(
csr_compat.rowPtr,
csr_compat.colVal,
reinterpret($elty, csr_compat.nzVal),
size(csr_compat)
)
end
function CuSparseMatrixCSC{$elty, Cint}(csr::CuSparseMatrixCSR{$elty, Cint})
csr_compat = CuSparseMatrixCSR{$felty, Cint}(
csr.rowPtr,
csr.colVal,
reinterpret($felty, csr.nzVal),
size(csr)
)
csc_compat = CuSparseMatrixCSC(csr_compat)
CuSparseMatrixCSC{$elty, Cint}(
csc_compat.colPtr,
csc_compat.rowVal,
reinterpret($elty, csc_compat.nzVal),
size(csc_compat)
)
end
end
end
## CSR to BSR and vice-versa
for (fname,elty) in ((:cusparseScsr2bsr, :Float32),
(:cusparseDcsr2bsr, :Float64),
(:cusparseCcsr2bsr, :ComplexF32),
(:cusparseZcsr2bsr, :ComplexF64))
@eval begin
CuSparseMatrixBSR{$elty}(csr::CuSparseMatrixCSR{$elty, Cint}, blockDim::Integer;
dir::SparseChar='R', inda::SparseChar='O', indc::SparseChar='O') =
CuSparseMatrixBSR{$elty, Cint}(csr, blockDim; dir, inda, indc)
function CuSparseMatrixBSR{$elty, Cint}(csr::CuSparseMatrixCSR{$elty, Cint}, blockDim::Integer;
dir::SparseChar='R', inda::SparseChar='O',
indc::SparseChar='O')
m,n = size(csr)
nnz_ref = Ref{Cint}(1)
mb = cld(m, blockDim)
nb = cld(n, blockDim)
bsrRowPtr = CUDA.zeros(Cint,mb + 1)
cudesca = CuMatrixDescriptor('G', 'L', 'N', inda)
cudescc = CuMatrixDescriptor('G', 'L', 'N', indc)
cusparseXcsr2bsrNnz(handle(), dir, m, n, cudesca, csr.rowPtr,
csr.colVal, blockDim, cudescc, bsrRowPtr, nnz_ref)
bsrNzVal = CUDA.zeros($elty, nnz_ref[] * blockDim * blockDim )
bsrColInd = CUDA.zeros(Cint, nnz_ref[])
$fname(handle(), dir, m, n,
cudesca, nonzeros(csr), csr.rowPtr, csr.colVal,
blockDim, cudescc, bsrNzVal, bsrRowPtr,
bsrColInd)
CuSparseMatrixBSR{$elty, Cint}(bsrRowPtr, bsrColInd, bsrNzVal, size(csr), blockDim, dir, nnz_ref[])
end
end
end
for (fname,elty) in ((:cusparseSbsr2csr, :Float32),
(:cusparseDbsr2csr, :Float64),
(:cusparseCbsr2csr, :ComplexF32),
(:cusparseZbsr2csr, :ComplexF64))
@eval begin
CuSparseMatrixCSR{$elty}(bsr::CuSparseMatrixBSR{$elty, Cint};
inda::SparseChar='O', indc::SparseChar='O') =
CuSparseMatrixCSR{$elty, Cint}(bsr;inda, indc)
function CuSparseMatrixCSR{$elty, Cint}(bsr::CuSparseMatrixBSR{$elty, Cint};
inda::SparseChar='O', indc::SparseChar='O')
m,n = size(bsr)
mb = cld(m, bsr.blockDim)
nb = cld(n, bsr.blockDim)
cudesca = CuMatrixDescriptor('G', 'L', 'N', inda)
cudescc = CuMatrixDescriptor('G', 'L', 'N', indc)
csrRowPtr = CUDA.zeros(Cint, m + 1)
csrColInd = CUDA.zeros(Cint, nnz(bsr))
csrNzVal = CUDA.zeros($elty, nnz(bsr))
$fname(handle(), bsr.dir, mb, nb,
cudesca, nonzeros(bsr), bsr.rowPtr, bsr.colVal,
bsr.blockDim, cudescc, csrNzVal, csrRowPtr,
csrColInd)
# XXX: the size here may not match the expected size, when the matrix dimension
# is not a multiple of the block dimension!
CuSparseMatrixCSR{$elty, Cint}(csrRowPtr, csrColInd, csrNzVal, (mb*bsr.blockDim, nb*bsr.blockDim))
end
end
end
# implement Int conversions using reinterpreted Float
for (elty, felty) in ((:Int16, :Float16),
(:Int32, :Float32),
(:Int64, :Float64),
(:Int128, :ComplexF64))
@eval begin
CuSparseMatrixCSR{$elty}(bsr::CuSparseMatrixBSR{$elty, Cint}) = CuSparseMatrixCSR{$elty, Cint}(bsr)
CuSparseMatrixBSR{$elty}(csr::CuSparseMatrixCSR{$elty, Cint}, blockDim) = CuSparseMatrixBSR{$elty, Cint}(csr, blockDim)
function CuSparseMatrixCSR{$elty, Cint}(bsr::CuSparseMatrixBSR{$elty, Cint})
bsr_compat = CuSparseMatrixBSR{$elty, Cint}(
bsr.rowPtr,
bsr.colVal,
reinterpret($felty, bsr.nzVal),
bsr.blockDim,
bsr.dir,
bsr.nnzb,
size(bsr)
)
csr_compat = CuSparseMatrixCSR{$elty, Cint}(bsr_compat)
CuSparseMatrixCSR{$elty, Cint}(
csr_compat.rowPtr,
csr_compat.colVal,
reinterpret($elty, csr_compat.nzVal),
size(csr_compat)
)
end
function CuSparseMatrixBSR{$elty, Cint}(csr::CuSparseMatrixCSR{$elty, Cint}, blockDim)
csr_compat = CuSparseMatrixCSR{$elty, Cint}(
csr.rowPtr,
csr.colVal,
reinterpret($felty, csr.nzVal),
size(csr)
)
bsr_compat = CuSparseMatrixBSR{$elty, Cint}(csr_compat, blockDim)
CuSparseMatrixBSR{$elty, Cint}(
bsr_compat.rowPtr,
bsr_compat.colVal,
reinterpret($elty, bsr_compat.nzVal),
bsr_compat.blockDim,
bsr_compat.dir,
bsr_compat.nnzb,
size(bsr_compat)
)
end
end
end
## CSR to COO and vice-versa
# TODO: we can do similar for CSC conversions, but that requires the columns to be sorted
function CuSparseMatrixCSR(coo::CuSparseMatrixCOO{Tv}, ind::SparseChar='O') where {Tv}
m,n = size(coo)
csrRowPtr = CuVector{Cint}(undef, m+1)
cusparseXcoo2csr(handle(), coo.rowInd, nnz(coo), m, csrRowPtr, ind)
CuSparseMatrixCSR{Tv}(csrRowPtr, coo.colInd, nonzeros(coo), size(coo))
end
function CuSparseMatrixCOO(csr::CuSparseMatrixCSR{Tv}, ind::SparseChar='O') where {Tv}
m,n = size(csr)
cooRowInd = CuVector{Cint}(undef, nnz(csr))
cusparseXcsr2coo(handle(), csr.rowPtr, nnz(csr), m, cooRowInd, ind)
CuSparseMatrixCOO{Tv}(cooRowInd, csr.colVal, nonzeros(csr), size(csr), nnz(csr))
end
### CSC/BSR to COO and viceversa
CuSparseMatrixCSC(coo::CuSparseMatrixCOO) = CuSparseMatrixCSC(CuSparseMatrixCSR(coo)) # no direct conversion
CuSparseMatrixCOO(csc::CuSparseMatrixCSC) = CuSparseMatrixCOO(CuSparseMatrixCSR(csc)) # no direct conversion
CuSparseMatrixBSR(coo::CuSparseMatrixCOO, blockdim) = CuSparseMatrixBSR(CuSparseMatrixCSR(coo), blockdim) # no direct conversion
CuSparseMatrixCOO(bsr::CuSparseMatrixBSR) = CuSparseMatrixCOO(CuSparseMatrixCSR(bsr)) # no direct conversion
## sparse to dense, and vice-versa
for (cname,rname,elty) in ((:cusparseScsc2dense, :cusparseScsr2dense, :Float32),
(:cusparseDcsc2dense, :cusparseDcsr2dense, :Float64),
(:cusparseCcsc2dense, :cusparseCcsr2dense, :ComplexF32),
(:cusparseZcsc2dense, :cusparseZcsr2dense, :ComplexF64))
@eval begin
function CUDA.CuMatrix{$elty}(csr::CuSparseMatrixCSR{$elty}; ind::SparseChar='O')
m,n = size(csr)
denseA = CUDA.zeros($elty,m,n)
if version() >= v"11.3.0" # CUSPARSE version from CUDA release notes
desc_csr = CuSparseMatrixDescriptor(csr, ind)
desc_dense = CuDenseMatrixDescriptor(denseA)
function bufferSize()
out = Ref{Csize_t}(1)
cusparseSparseToDense_bufferSize(handle(), desc_csr, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseSparseToDense(handle(), desc_csr, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, buffer)
end
return denseA
else
cudesc = CuMatrixDescriptor('G', 'L', 'N', ind)
lda = max(1,stride(denseA,2))
$rname(handle(), m, n, cudesc, nonzeros(csr),
csr.rowPtr, csr.colVal, denseA, lda)
return denseA
end
end
function CUDA.CuMatrix{$elty}(csc::CuSparseMatrixCSC{$elty}; ind::SparseChar='O')
m,n = size(csc)
denseA = CUDA.zeros($elty,m,n)
if version() >= v"11.3.0" # CUSPARSE version from CUDA release notes
desc_csc = CuSparseMatrixDescriptor(csc, ind; convert=false)
desc_dense = CuDenseMatrixDescriptor(denseA)
function bufferSize()
out = Ref{Csize_t}(1)
cusparseSparseToDense_bufferSize(handle(), desc_csc, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseSparseToDense(handle(), desc_csc, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, buffer)
end
return denseA
else
lda = max(1,stride(denseA,2))
cudesc = CuMatrixDescriptor('G', 'L', 'N', ind)
$cname(handle(), m, n, cudesc, nonzeros(csc),
rowvals(csc), csc.colPtr, denseA, lda)
return denseA
end
end
end
end
for (elty, welty) in ((:Float16, :Float32),
(:ComplexF16, :ComplexF32))
@eval begin
function CUDA.CuMatrix{$elty}(csr::CuSparseMatrixCSR{$elty}; ind::SparseChar='O')
m,n = size(csr)
denseA = CUDA.zeros($elty,m,n)
if version() >= v"11.3.0" # CUSPARSE version from CUDA release notes
desc_csr = CuSparseMatrixDescriptor(csr, ind)
desc_dense = CuDenseMatrixDescriptor(denseA)
function bufferSize()
out = Ref{Csize_t}(1)
cusparseSparseToDense_bufferSize(handle(), desc_csr, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseSparseToDense(handle(), desc_csr, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, buffer)
end
return denseA
else
wide_csr = CuSparseMatrixCSR(csr.rowPtr, csr.colVal, convert(CuVector{$welty}, nonzeros(csr)), size(csr))
wide_dense = CuArray{$welty}(wide_csr)
denseA = convert(CuArray{$elty}, wide_dense)
return denseA
end
end
function CUDA.CuMatrix{$elty}(csc::CuSparseMatrixCSC{$elty}; ind::SparseChar='O')
m,n = size(csc)
denseA = CUDA.zeros($elty,m,n)
if version() >= v"11.3.0" # CUSPARSE version from CUDA release notes
desc_csc = CuSparseMatrixDescriptor(csc, ind; convert=false)
desc_dense = CuDenseMatrixDescriptor(denseA)
function bufferSize()
out = Ref{Csize_t}(1)
cusparseSparseToDense_bufferSize(handle(), desc_csc, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, out)
return out[]
end
with_workspace(bufferSize) do buffer
cusparseSparseToDense(handle(), desc_csc, desc_dense,
CUSPARSE_SPARSETODENSE_ALG_DEFAULT, buffer)
end
return denseA
else
wide_csc = CuSparseMatrixCSC(csc.colPtr, csc.rowVal, convert(CuVector{$welty}, nonzeros(csc)), size(csc))
wide_dense = CuArray{$welty}(wide_csc)
denseA = convert(CuArray{$elty}, wide_dense)
return denseA
end
end
end
end
Base.copyto!(dest::Array{T, 2}, src::AbstractCuSparseMatrix{T}) where T = copyto!(dest, CuMatrix{T}(src))
for (nname,cname,rname,elty) in ((:cusparseSnnz, :cusparseSdense2csc, :cusparseSdense2csr, :Float32),
(:cusparseDnnz, :cusparseDdense2csc, :cusparseDdense2csr, :Float64),
(:cusparseCnnz, :cusparseCdense2csc, :cusparseCdense2csr, :ComplexF32),
(:cusparseZnnz, :cusparseZdense2csc, :cusparseZdense2csr, :ComplexF64))
@eval begin
function CuSparseMatrixCSR(A::CuMatrix{$elty}; ind::SparseChar='O')
m,n = size(A)
lda = max(1, stride(A,2))
cudesc = CuMatrixDescriptor('G',
'L',
'N', ind)
nnzRowCol = CUDA.zeros(Cint, m)
nnzTotal = Ref{Cint}(1)
$nname(handle(),
'R', m, n, cudesc, A, lda, nnzRowCol,
nnzTotal)
nzVal = CUDA.zeros($elty,nnzTotal[])
rowPtr = CUDA.zeros(Cint,m+1)
colInd = CUDA.zeros(Cint,nnzTotal[])
$rname(handle(), m, n, cudesc, A,
lda, nnzRowCol, nzVal, rowPtr, colInd)
return CuSparseMatrixCSR(rowPtr,colInd,nzVal,size(A))
end
function CuSparseMatrixCSC(A::CuMatrix{$elty}; ind::SparseChar='O')
m,n = size(A)
lda = max(1, stride(A,2))
cudesc = CuMatrixDescriptor('G',
'L',
'N', ind)
nnzRowCol = CUDA.zeros(Cint, n)
nnzTotal = Ref{Cint}(1)
$nname(handle(),
'C', m, n, cudesc, A, lda, nnzRowCol,
nnzTotal)
nzVal = CUDA.zeros($elty,nnzTotal[])
colPtr = CUDA.zeros(Cint,n+1)
rowInd = CUDA.zeros(Cint,nnzTotal[])
$cname(handle(), m, n, cudesc, A,
lda, nnzRowCol, nzVal, rowInd, colPtr)
return CuSparseMatrixCSC(colPtr,rowInd,nzVal,size(A))
end
end
end
# to do: use cusparseDenseToSparse_convert here
for (elty, welty) in ((:Float16, :Float32),
(:ComplexF16, :ComplexF32))
@eval begin
function CuSparseMatrixCSR(A::CuMatrix{$elty}; ind::SparseChar='O')
wide_csr = CuSparseMatrixCSR(convert(CuMatrix{$welty}, A))
return CuSparseMatrixCSR(wide_csr.rowPtr, wide_csr.colVal, convert(CuVector{$elty}, nonzeros(wide_csr)), size(wide_csr))
end
function CuSparseMatrixCSC(A::CuMatrix{$elty}; ind::SparseChar='O')
wide_csc = CuSparseMatrixCSC(convert(CuMatrix{$welty}, A))
return CuSparseMatrixCSC(wide_csc.colPtr, wide_csc.rowVal, convert(CuVector{$elty}, nonzeros(wide_csc)), size(wide_csc))
end
end
end
function CUDA.CuMatrix{T}(bsr::CuSparseMatrixBSR{T}; inda::SparseChar='O',
indc::SparseChar='O') where {T}
CuMatrix{T}(CuSparseMatrixCSR{T}(bsr; inda, indc))
end
function CuSparseMatrixBSR(A::CuMatrix; ind::SparseChar='O')
m,n = size(A) # TODO: always let the user choose, or provide defaults for other methods too
CuSparseMatrixBSR(CuSparseMatrixCSR(A; ind), gcd(m,n))
end