[FEATURE] Added Filters for Drugs (#81)

TheCedarPrince · Jay-sanjay · VarshC · web-flow · commit 76615e6dd1e1 · 2024-11-11T22:34:13.000-05:00
* Tag New Release of 0.5.0 (#76)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Expanded CI to test on Windows &amp; OSX and Julia Versions 1, Nightly, and LTS (#35)

* Tag New Release v2.0.0 (#33)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Tagged new release

* Revamped README details about package

* Added docstring to ExecuteAudit

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Moved paper document to its own branch while in progress

* Quickfix to R tutorial on strep_patients

* Expanded CI to test on windows, OSX, and 1.6

* Attempt at making CI process more reasonable

* Removed paper directory again

* Bumped for minor patch release

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Added function to get place of service information (#39)

Added GetVisitPlaceOfService getter

* Added GetVisitConcept getter function (#41)

* issue #44 add GetVisitDate (#45)

* added a function GetVisitDate and its tests. Also fixed test for GetVisitConcept

* Removed SQLite dep

* Added and updated docstrings

---------

Co-authored-by: Varshini Chinta &lt;vchinta6@icl.gtri.org&gt;
Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;

* Adding the column name (#43)

* Tag Release of v0.2.1 (#37)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Expanded CI to test on Windows &amp; OSX and Julia Versions 1, Nightly, and LTS (#35)

* Tag New Release v2.0.0 (#33)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Tagged new release

* Revamped README details about package

* Added docstring to ExecuteAudit

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Moved paper document to its own branch while in progress

* Quickfix to R tutorial on strep_patients

* Expanded CI to test on windows, OSX, and 1.6

* Attempt at making CI process more reasonable

* Removed paper directory again

* Bumped for minor patch release

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Adding the column name

---------

Co-authored-by: Jacob S. Zelko &lt;jacobszelko@gmail.com&gt;
Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Bumped compat and release version

* Updated CHANGELOG for new release

* Bumped release version

* Added GetVisitProcedure associated with someones visit (#59)

* Tag Release of v0.2.2 (#46)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Expanded CI to test on Windows &amp; OSX and Julia Versions 1, Nightly, and LTS (#35)

* Tag New Release v2.0.0 (#33)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Tagged new release

* Revamped README details about package

* Added docstring to ExecuteAudit

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Moved paper document to its own branch while in progress

* Quickfix to R tutorial on strep_patients

* Expanded CI to test on windows, OSX, and 1.6

* Attempt at making CI process more reasonable

* Removed paper directory again

* Bumped for minor patch release

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Added function to get place of service information (#39)

Added GetVisitPlaceOfService getter

* Added GetVisitConcept getter function (#41)

* issue #44 add GetVisitDate (#45)

* added a function GetVisitDate and its tests. Also fixed test for GetVisitConcept

* Removed SQLite dep

* Added and updated docstrings

---------

Co-authored-by: Varshini Chinta &lt;vchinta6@icl.gtri.org&gt;
Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;

* Adding the column name (#43)

* Tag Release of v0.2.1 (#37)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Expanded CI to test on Windows &amp; OSX and Julia Versions 1, Nightly, and LTS (#35)

* Tag New Release v2.0.0 (#33)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Updated changelog for new release

* Beginning draft of submission

* Creating header affiliations

* Autogenerated or compiled files

* Ruby routine for generating header.tex

* Removed Memoization dependency for user flexibility

* Added dispatches to render SQL; found bug in GetPatientAgeGroup

* Added get function for ethnicity

* Cherry picking some files to resolve conflicts

* Initial Tests for Getters, Filters, and Executors (#24)

* Version 0.1.0 Release (#4)

* Removed type signatures + fixed docstrings; lowercased table names and columns in prep for OMOPCDM

* Added TODO's for what tests to write

* Removed type signatures and added TODO for futures

* Removed type signatures

* Removed type signatures

* Raised proposal to CDM maintainers and am awaiting feedback before moving forward on this

* Removed type signatures and fixed bug with GetPatientVisits to correctly return patient visits

* Changed docstring in StateFilterPersonIDs and enforced uppercasing for state abbreviations; added exports

* Added and updated CHANGELOG

* Bumped project version numbers for new release

* Removed as it was an early testing prototype file

* Began revising tutorial documentation

* Removed Manifest file for package

* Added Dates and TimeZones deps for managing age groups

* Disallowed some exports and created new function for generating defaults

* Added new deps Dates and TimeZones for time management

* Began refactoring of GetPatientAgeGroup

* Refactored GetPatientAgeGroup to correctly get age group of patients

* Removed AgeGroupFilter in favor of supporting GetPatientAgeGroup and fixed docstrings

* Added SampleData compat and dependency

* Renamed files and fixed docs

* Fixed documentation and fixed methods for calculating age

* Added helper function to determine year

* Started adding first batch of tests

* Added helpers file

* Removed entry for SampleHealthData until merge of package occurs

* Converted this function to internal helper function

* Added new tests and dependencies

* Added tests for GetPatientGender, GetPatientAgeGroup, GetPatientRace, and GetDatabasePersonIDs

* Added ignore for various Julia artifacts

* Initial drafting of full tutorial

* Finished initial beginner tutorial

* Updated README with badges and documentation link

* Modified footer

* Updated landing page

* Reordered pages on sidebar

* Added todo action to automatically create todos

* Added todos for issues in getters

* Removed dependency on HealthSampleData and compat entries

* Added todosfor multiple tests that need to be created

* Uncommented test sets for running and added todo for Generators

* Created test for GetPatientVisits()

* Created Test for ExecuteAudit()

* Created test for GetMostRecentVisit

* updated tests

* started creating test for GetVisitCondition

* Changed GetVisitCondition Test

* created test for VisitFilterPersonIDs

* Added test for filters.jl

* Finished tests for filters

* Added a test step for code coverage

* Removed VSCode configurations

* Bumped compat entry for HealthSampleData

* Removed todos and fixed GenderFilterPersonIDs test

* Removed unnecessary comments

* For allowing HealthSampleData to always download sample data

* Test with adding latest codecoverage version

* Added code coverage badge icon

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Simplify Age Calculations (#27)

* Added SQL generation for filter statements

* Removed option for internal DB calculation

* Fixed GetPatientAgeGroup and added GetDatabaseYearRange and updated docstrings

* Updated test suite

* Removed old tests for GetPatientAgeGroup

* Updated tests for helper functions

* Added Additional Test Coverage for Getters and Helpers (#28)

* Updated docstrings for SQL rendering

* Updated docstrings, formatting, and enforced String returns for SQL dispatches

* Updated test explanation

* Added test suite for GetMostRecentConditions and formatted

* Fix to Docs Deployment (#29)

* Testing fix for docs deployment

* Expected the OMOPCDMCohortCreator package to be available

* Added push preview information and the edit link

* Fixed deprecation warning

* Final layout fixes to collapselevel

* Final fix

* Update to Beginner Tutorial and Minor Refactor of Tutorials Layout (#30)

* Configured nesting of tutorial

* Updated landing page description

* Broke up tutorial pages

* Added revamped beginner tutorial

* Overhaul of Docs (#31)

* Moved beginner tutorial

* Added tutorial for R usage

* Updated index of tutorials

* Fixed up tutorials index

* Renamed R tutorial

* Clarified links for tutorials

* Julia on the brain

* Added contributing guide

* Added contributing guide

* Updated API exports

* Revamped overview of package

* Added the most necessary of all things: emojis :sparkles:

* Fixed up emojis

* Fixed up API table of contents

* Fixed emojis

* Updated main features of package

* Removed emoji

* Updated and fixed Citation file (#32)

* Tagged new release

* Revamped README details about package

* Added docstring to ExecuteAudit

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Moved paper document to its own branch while in progress

* Quickfix to R tutorial on strep_patients

* Expanded CI to test on windows, OSX, and 1.6

* Attempt at making CI process more reasonable

* Removed paper directory again

* Bumped for minor patch release

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Adding the column name

---------

Co-authored-by: Jacob S. Zelko &lt;jacobszelko@gmail.com&gt;
Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;

* Bumped compat and release version

* Updated CHANGELOG for new release

* Bumped release version

---------

Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;
Co-authored-by: Farreeda &lt;94711213+Farreeda@users.noreply.github.com&gt;

* fixing issues (#54)

* fixing issues

* removing useless packages

* change variable name to df

* Adding documenting comments to explain multiple dispatch

* docs and tests

Tests need some check for GetAmounts

* issue #55

* Re-enabled pull request workflows

* fixing test errors and tutorial changes

* increasing code coverage

* maybe it needs space before @testset

---------

Co-authored-by: Farreeda &lt;fareedaabdelazeez@gmail.com&gt;
Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;

* Tagging for 0.3.0 release

* added Getter

* add to api.md

* added test cases

* moved to getters

* reverts

* test cases updated

* Adding a few more tests and satisfying CodeCov

* resolved

* resolved

* added some final test cases

* corrected the test cases

---------

Co-authored-by: Jacob S. Zelko &lt;jacobszelko@gmail.com&gt;
Co-authored-by: VarshC &lt;49307186+VarshC@users.noreply.github.com&gt;
Co-authored-by: Chinta &lt;vchinta6@icl.gtri.org&gt;
Co-authored-by: Farreeda &lt;94711213+Farreeda@users.noreply.github.com&gt;
Co-authored-by: Farreeda &lt;fareedaabdelazeez@gmail.com&gt;

* Resolving `ExecuteAudit` function getting Breaked Easily  (#60)

* updated executaors.jl

* fixed doc

* added the test cases

* renamed to GetDrugExposureIDs (#63)

* renamed to GetDrugExposureIDs

* Updated changelog for new changes

* Updated docstring for Drug Exposures

---------

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;

* Creating Queries That Return Cohort Information (#61)

* added GetCohortSubjects

* updated runtests.jl

* Added additional test dependencies

* Fixed up imports and generating initial cohort

* Added test cohort definition asset

* added tests for GetCohortSubjects

* corrected

* added GetCohortSubjectStartDate

* test suite for GetCohortSubjectStartDate

* added a dispatch for GetDatabaseCohorts

* added GetCohortSubjectEndDate

* Added notes and fixed a docstring error

* requested changes made

* added requested changes

* added requested changes

* Small fix to return unique IDs and doc updates

* Fixed export signature

---------

Co-authored-by: TheCedarPrince &lt;jacobszelko@gmail.com&gt;

* Added GetDrugExposureEndDate function (#71)

* added GetDrugExposureEndDate

* added

* api.md

* Added GetDrugExposureStartDate function (#72)

* GetDrugExposureStartDate added

* Itty bitty typo fix

* similar typo fixed

---------

Co-authored-by: Jacob …
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -5,6 +5,28 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](http://keepachangelog.com/)
 and this project adheres to [Semantic Versioning](http://semver.org/).
 
+## [0.6.0] - November 11th, 2024
+
+New minor release introducing some new features and dropping of old dependencies
+
+## [0.5.0] - February 23rd, 2024
+
+Patch release to add in some new features and fixes 
+
+### Added 
+
+- Added Getters for Drug Exposures
+
+  *  GetDrugExposureStartDate
+
+  *  GetDrugExposureEndDate
+
+- Misc
+
+  * Minor fixes in  GetPatientAgeGroup Function
+  
+- Extensive test suite for new features
+
 
 ## [0.4.0] - December 1st, 2023
 
diff --git a/CITATION.cff b/CITATION.cff
@@ -10,7 +10,7 @@ authors:
     given-names: Fareeda
   - family-names: Sanjay
     given-names: Jay
-title: "OMOPCDMCohortCreator 0.4.0"
-version: 0.4.0
+title: "OMOPCDMCohortCreator 0.5.0"
+version: 0.5.0
 doi: 10.5281/zenodo.7052105
-date-released: 2023-12-01
+date-released: 2024-02-23
diff --git a/Project.toml b/Project.toml
@@ -1,7 +1,7 @@
 name = "OMOPCDMCohortCreator"
 uuid = "f525a15e-a73f-4eef-870f-f901257eae22"
 authors = ["Jacob Zelko <jacobszelko@gmail.com>", "Fareeda Abdelazeez", "Varshini Chinta", "Jay Sanjay <landgejay124@gmail.com>"]
-version = "0.4.0"
+version = "0.6.0"
 
 [deps]
 DBInterface = "a10d1c49-ce27-4219-8d33-6db1a4562965"
diff --git a/docs/Project.toml b/docs/Project.toml
@@ -1,4 +1,5 @@
 [deps]
 Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
 DocumenterTools = "35a29f4d-8980-5a13-9543-d66fff28ecb8"
+LiveServer = "16fef848-5104-11e9-1b77-fb7a48bbb589"
 OMOPCDMCohortCreator = "f525a15e-a73f-4eef-870f-f901257eae22"
diff --git a/src/filters.jl b/src/filters.jl
@@ -282,4 +282,31 @@ function StateFilterPersonIDs(states; tab = location, join_tab = person)
 
 end
 
-export VisitFilterPersonIDs, ConditionFilterPersonIDs, RaceFilterPersonIDs, GenderFilterPersonIDs, StateFilterPersonIDs
+"""
+TODO: Update these docstrings
+"""
+function DrugExposureFilterPersonIDs(
+    drug_concept_ids, conn;
+    tab = drug_exposure,
+)
+    df = DBInterface.execute(conn, DrugExposureFilterPersonIDs(drug_concept_ids; tab = tab)) |> DataFrame
+
+    return df 
+
+end
+
+function DrugExposureFilterPersonIDs(
+    drug_concept_ids;
+    tab = drug_exposure,
+)
+    sql =
+        From(tab) |>
+        Where(Fun.in(Get.drug_concept_id, drug_concept_ids...)) |>
+        Group(Get.person_id) |>
+        q -> render(q, dialect = dialect)
+
+        return String(sql)
+
+end
+
+export VisitFilterPersonIDs, ConditionFilterPersonIDs, RaceFilterPersonIDs, GenderFilterPersonIDs, StateFilterPersonIDs
