Skip to content

Commit f0fa88a

Browse files
authored
Pin torch package (#181)
http://b/224540778
1 parent 18e766a commit f0fa88a

File tree

3 files changed

+5
-1
lines changed

3 files changed

+5
-1
lines changed

bioconductor_installs.R

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -10,6 +10,7 @@ if (!requireNamespace("BiocManager", quietly = TRUE))
1010

1111
BiocManager::install(update=FALSE, ask=FALSE)
1212
BiocManager::install("BiocGenerics", update=FALSE, ask=FALSE)
13+
install_version("locfit", version = "1.5.9.4", ask=FALSE)
1314
BiocManager::install("EBImage", update=FALSE, ask=FALSE)
1415
BiocManager::install("rhdf5", update=FALSE, ask=FALSE)
1516
BiocManager::install("limma", update=FALSE, ask=FALSE)

gpu.Dockerfile

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -71,7 +71,8 @@ RUN CPATH=/usr/local/cuda/targets/x86_64-linux/include install2.r --error --ncpu
7171

7272
# Torch: install the full package upfront otherwise it will be installed on loading the package which doesn't work for kernels
7373
# without internet (competitions for example). It will detect CUDA and install the proper version.
74-
RUN R -e 'install.packages("torch")'
74+
# TODO(b/224540778) Unpin Torch.
75+
RUN R -e 'library(devtools); install_version("torch", version = "0.6.0", ask=FALSE)'
7576
RUN R -e 'library(torch); install_torch(reinstall = TRUE)'
7677

7778
CMD ["R"]

package_installs.R

Lines changed: 2 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -52,6 +52,8 @@ install.packages("imager")
5252

5353
# Torch: install the full package upfront otherwise it will be installed on loading the package which doesn't work for kernels
5454
# without internet (competitions for example).
55+
# TODO(b/224540778) Unpin Torch.
56+
install_version("torch", version = "0.6.0", ask=FALSE)
5557
library(torch)
5658
install_torch(reinstall = TRUE)
5759

0 commit comments

Comments
 (0)