version 0.1.4 final #11

	# This workflow installs Python dependencies, runs tests and lints with a single version of Python
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: microbiorust-py python tests

	on:
	push:
	branches: [ "main" ]
	paths:
	- 'microbiorust-py/**'
	pull_request:
	branches: [ "main" ]
	paths:
	- 'microbiorust-py/**'

	permissions:
	contents: read

	jobs:
	build:

	runs-on: ubuntu-latest
	env:
	FORCE_JAVASCRIPT_ACTIONS_TO_NODE24: true
	steps:
	- uses: actions/checkout@v4
	- name: Set up Python 3.12
	uses: actions/setup-python@v5
	with:
	python-version: "3.12"
	cache: 'pip'
	cache-dependency-path: 'microbiorust-py/pyproject.toml'

	- name: Set up Rust
	uses: dtolnay/rust-toolchain@stable

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install maturin ruff pytest
	pip install ./microbiorust-py

	- name: Lint with ruff
	run: \|
	# stop the build for critical errors (E9, F63, F7, F82 equivalents)
	ruff check microbiorust-py/ --select E9,F63,F7,F82 --output-format=full
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	ruff check microbiorust-py/ --exit-zero --line-length=127

	- name: Test with pytest
	run: \|
	pytest -v
	working-directory: microbiorust-py/tests

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