Run new black (v26).

vitenti · vitenti · commit c78e41014529 · 2026-01-27T15:39:59.000-03:00
diff --git a/examples/cluster_number_counts/generate_rich_mean_mass_sacc_data_withshear.py b/examples/cluster_number_counts/generate_rich_mean_mass_sacc_data_withshear.py
@@ -1,6 +1,7 @@
 #!/usr/bin/env python
 
 """Function to generate a SACC file for cluster number counts and cluster DeltaSigma."""
+
 import os
 from typing import Tuple
 
diff --git a/examples/des_y1_3x2pt/factory_PT.py b/examples/des_y1_3x2pt/factory_PT.py
@@ -1,6 +1,7 @@
 #!/usr/bin/env python
 
 """Example factory function for DES Y1 3x2pt likelihood."""
+
 from dataclasses import dataclass
 import os
 
@@ -19,7 +20,6 @@
 from firecrown.modeling_tools import CCLFactory
 from firecrown.updatable import get_default_params_map
 
-
 saccfile = os.path.expanduser(
     os.path.expandvars("${FIRECROWN_DIR}/examples/des_y1_3x2pt/sacc_data.hdf5")
 )
diff --git a/firecrown/app/examples/_des_y1_3x2pt.py b/firecrown/app/examples/_des_y1_3x2pt.py
@@ -183,31 +183,22 @@ def _get_yaml_config(self, sacc: Path) -> str:
 """
 
         if self.factory_type == DESY1FactoryType.YAML_PURE_CCL:
-            return (
-                base_config
-                + """
+            return base_config + """
 ccl_factory:
   creation_mode: 'pure_ccl_mode'
   require_nonlinear_pk: true
 """
-            )
         if self.factory_type == DESY1FactoryType.YAML_MU_SIGMA:
-            return (
-                base_config
-                + """
+            return base_config + """
 ccl_factory:
   creation_mode: 'mu_sigma_isitgr'
   require_nonlinear_pk: true
 """
-            )
 
-        return (
-            base_config
-            + """
+        return base_config + """
 ccl_factory:
   require_nonlinear_pk: true
 """
-        )
 
     def get_build_parameters(self, sacc_path: Path) -> NamedParameters:
         """Return build parameters for likelihood construction.
diff --git a/firecrown/app/sacc/_utils.py b/firecrown/app/sacc/_utils.py
@@ -8,7 +8,6 @@
 
 from firecrown import metadata_types as mdt
 
-
 QuadOpts = TypedDict(
     "QuadOpts",
     {
diff --git a/firecrown/fctools/code_block_checker.py b/firecrown/fctools/code_block_checker.py
@@ -7,7 +7,6 @@
 import typer
 from rich.console import Console
 
-
 app = typer.Typer()
 
 
diff --git a/firecrown/fctools/symbol_reference_checker.py b/firecrown/fctools/symbol_reference_checker.py
@@ -21,7 +21,6 @@
     print_success,
 )
 
-
 app = typer.Typer()
 
 
diff --git a/firecrown/likelihood/_base.py b/firecrown/likelihood/_base.py
@@ -44,7 +44,6 @@
     register_new_updatable_parameter,
 )
 
-
 # ============================================================================
 # Classes from _likelihood.py
 # ============================================================================
diff --git a/firecrown/likelihood/number_counts/_source.py b/firecrown/likelihood/number_counts/_source.py
@@ -25,7 +25,6 @@
     UpdatableCollection,
 )
 
-
 NUMBER_COUNTS_DEFAULT_BIAS = 1.5
 
 
diff --git a/firecrown/updatable/_collection.py b/firecrown/updatable/_collection.py
@@ -12,7 +12,6 @@
 from firecrown.updatable._records import UpdatableUsageRecord
 from firecrown.updatable._types import UpdatableProtocol
 
-
 T = TypeVar("T", bound=Updatable)
 
 
diff --git a/tests/app/analysis/test_analysis_builder.py b/tests/app/analysis/test_analysis_builder.py
@@ -90,8 +90,7 @@ def test_initialization_with_custom_cosmology(self, tmp_path: Path) -> None:
         """Test initialization with custom cosmology specification."""
         # Create a cosmology spec file
         cosmo_file = tmp_path / "cosmology.yaml"
-        cosmo_file.write_text(
-            r"""
+        cosmo_file.write_text(r"""
 name: test_cosmology
 description: Test cosmology
 parameters:
@@ -155,8 +154,7 @@ def test_initialization_with_custom_cosmology(self, tmp_path: Path) -> None:
     upper_bound: 1.0
     default_value: 0.0
     free: false
-"""
-        )
+""")
 
         with patch.object(ConcreteAnalysisBuilder, "_proceed_generation"):
             builder = ConcreteAnalysisBuilder(
diff --git a/tests/app/analysis/test_numcosmo_generator.py b/tests/app/analysis/test_numcosmo_generator.py
@@ -48,8 +48,7 @@ def fixture_minimal_factory_file(tmp_path: Path) -> Path:
     - Mock SACC data with 3 data points
     """
     factory_file = tmp_path / "factory.py"
-    factory_file.write_text(
-        """
+    factory_file.write_text("""
 import sacc
 import numpy as np
 from firecrown.likelihood.number_counts import NumberCounts
@@ -77,8 +76,7 @@ def build_likelihood(_):
     likelihood = ConstGaussian(statistics=statistics)
     likelihood.read(sacc_data)
     return likelihood
-""".strip()
-    )
+""".strip())
     return factory_file
 
 
diff --git a/tests/app/analysis/test_numcosmo_integration.py b/tests/app/analysis/test_numcosmo_integration.py
@@ -43,8 +43,7 @@ def fixture_minimal_factory_file(tmp_path: Path) -> Path:
     - Mock SACC data with 3 data points
     """
     factory_file = tmp_path / "factory.py"
-    factory_file.write_text(
-        """
+    factory_file.write_text("""
 import sacc
 import numpy as np
 from firecrown.likelihood.number_counts import NumberCounts
@@ -72,8 +71,7 @@ def build_likelihood(_):
     likelihood = ConstGaussian(statistics=statistics)
     likelihood.read(sacc_data)
     return likelihood
-""".strip()
-    )
+""".strip())
     return factory_file
 
 
diff --git a/tests/app/sacc/test_view.py b/tests/app/sacc/test_view.py
@@ -19,7 +19,6 @@
     UnknownWarningHandler,
 )
 
-
 # pylint: disable=too-many-lines
 
 
diff --git a/tests/conftest.py b/tests/conftest.py
@@ -45,7 +45,6 @@
 import firecrown.likelihood._cmb as cmb
 from firecrown.metadata_types import Clusters, CMB
 
-
 # Helper function for creating AST ClassDef nodes across Python versions
 if sys.version_info >= (3, 12):
 
diff --git a/tests/fctools/test_code_block_checker.py b/tests/fctools/test_code_block_checker.py
@@ -10,7 +10,6 @@
 
 from firecrown.fctools.code_block_checker import check_qmd_file, app
 
-
 # Create CliRunner instance for testing
 runner = CliRunner()
 
diff --git a/tests/fctools/test_common.py b/tests/fctools/test_common.py
@@ -150,14 +150,12 @@ class TestImportModuleFromFile:
     def test_import_valid_module(self, tmp_path, console):
         """Test importing a valid Python module from a file."""
         module_file = tmp_path / "test_module.py"
-        module_file.write_text(
-            """
+        module_file.write_text("""
 def test_function():
     return 42
 
 TEST_CONSTANT = "hello"
-"""
-        )
+""")
 
         module = import_module_from_file(console, module_file)
 
diff --git a/tests/fctools/test_generate_symbol_map.py b/tests/fctools/test_generate_symbol_map.py
@@ -20,7 +20,6 @@
     app,
 )
 
-
 # Test fixtures - create some mock objects
 
 
diff --git a/tests/fctools/test_symbol_reference_checker.py b/tests/fctools/test_symbol_reference_checker.py
@@ -9,7 +9,6 @@
     app,
 )
 
-
 # Create CliRunner instance for testing
 runner = CliRunner()
 
@@ -48,13 +47,11 @@ def test_check_qmd_file_valid_symbols(tmp_path):
     """Test checking a file with valid symbol references."""
     # Create a test .qmd file
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 # Test file
 
 This mentions `firecrown.parameters.Parameter` and `Updatable`.
-"""
-    )
+""")
 
     # Create a symbol map with these symbols
     symbol_map = {
@@ -69,11 +66,9 @@ def test_check_qmd_file_valid_symbols(tmp_path):
 def test_check_qmd_file_invalid_fully_qualified(tmp_path):
     """Test checking a file with invalid fully-qualified symbol."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 This mentions `firecrown.parameters.Paramater` (typo).
-"""
-    )
+""")
 
     symbol_map = {
         "firecrown.parameters.Parameter": "api/...",
@@ -88,11 +83,9 @@ def test_check_qmd_file_invalid_fully_qualified(tmp_path):
 def test_check_qmd_file_invalid_unqualified(tmp_path):
     """Test checking a file with invalid unqualified symbol."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 This mentions `Updateable` (typo, should be Updatable).
-"""
-    )
+""")
 
     symbol_map = {
         "firecrown.updatable.Updatable": "api/...",
@@ -106,13 +99,11 @@ def test_check_qmd_file_invalid_unqualified(tmp_path):
 def test_check_qmd_file_multiple_errors(tmp_path):
     """Test that all errors are reported, not just the first."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 Line 1 has `firecrown.invalid.Class1`
 Line 2 has `firecrown.invalid.Class2`
 Line 3 has `InvalidClass3`
-"""
-    )
+""")
 
     symbol_map = {
         "firecrown.valid.Something": "api/...",
@@ -128,12 +119,10 @@ def test_check_qmd_file_multiple_errors(tmp_path):
 def test_check_qmd_file_with_exclude_pattern(tmp_path):
     """Test that exclude pattern works."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 This has `firecrown.example.ExampleClass` which should be excluded.
 This has `firecrown.real.RealClass` which should be checked.
-"""
-    )
+""")
 
     symbol_map = {
         "firecrown.real.RealClass": "api/...",
@@ -152,11 +141,9 @@ def test_check_qmd_file_with_exclude_pattern(tmp_path):
 def test_check_qmd_file_lowercase_code_not_checked(tmp_path):
     """Test that lowercase code spans are not checked as symbols."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 This has `some_function` and `another_var` which are lowercase.
-"""
-    )
+""")
 
     symbol_map: dict[str, str] = {}  # Empty symbol map
 
@@ -168,11 +155,9 @@ def test_check_qmd_file_lowercase_code_not_checked(tmp_path):
 def test_check_qmd_file_partial_module_path(tmp_path):
     """Test validation of partial module paths."""
     qmd_file = tmp_path / "test.qmd"
-    qmd_file.write_text(
-        """
+    qmd_file.write_text("""
 Reference to `firecrown.likelihood` module.
-"""
-    )
+""")
 
     symbol_map = {
         "firecrown.likelihood": "api/...",
diff --git a/tests/fctools/test_tracer.py b/tests/fctools/test_tracer.py
@@ -448,14 +448,12 @@ def test_main_traces_script(tmp_path):
     """Test main traces a Python script."""
     # Create a simple test script
     script_file = tmp_path / "test_script.py"
-    script_file.write_text(
-        """
+    script_file.write_text("""
 def simple_function():
     return 42
 
 result = simple_function()
-"""
-    )
+""")
 
     trace_file = tmp_path / "output.tsv"
 
@@ -835,14 +833,12 @@ def inner():
 def test_cli_produces_valid_tsv(tmp_path):
     """Test that CLI produces valid TSV file."""
     script_file = tmp_path / "test_script.py"
-    script_file.write_text(
-        """
+    script_file.write_text("""
 def func():
     return 1
 
 func()
-"""
-    )
+""")
     trace_file = tmp_path / "output.tsv"
 
     result = subprocess.run(
diff --git a/tests/likelihood/gauss_family/statistic/test_statistic.py b/tests/likelihood/gauss_family/statistic/test_statistic.py
@@ -12,7 +12,6 @@
 from firecrown.modeling_tools import ModelingTools
 from firecrown.updatable import ParamsMap
 
-
 VECTOR_CLASSES = (firecrown.data_types.TheoryVector, firecrown.data_types.DataVector)
 
 
diff --git a/tests/likelihood/lkdir/lkscript_old.py b/tests/likelihood/lkdir/lkscript_old.py
@@ -4,6 +4,5 @@
 
 from . import lkmodule
 
-
 # Defines a module variable "likelihood"
 likelihood = lkmodule.empty_likelihood()
diff --git a/tests/likelihood/test_factories.py b/tests/likelihood/test_factories.py
diff --git a/tests/metadata/sacc_name_mapping.py b/tests/metadata/sacc_name_mapping.py
diff --git a/tests/models/cluster/test_integrators.py b/tests/models/cluster/test_integrators.py
diff --git a/tests/models/cluster/test_mass_proxy.py b/tests/models/cluster/test_mass_proxy.py
diff --git a/tests/test_pyccl.py b/tests/test_pyccl.py

Original file line number	Diff line number	Diff line change
`@@ -8,7 +8,6 @@`
`8`	`8`
`9`	`9`	`from firecrown import metadata_types as mdt`
`10`	`10`
`11`		`-`
`12`	`11`	`QuadOpts = TypedDict(`
`13`	`12`	`"QuadOpts",`
`14`	`13`	`{`
Original file line number	Diff line number	Diff line change
`@@ -21,7 +21,6 @@`
`21`	`21`	`print_success,`
`22`	`22`	`)`
`23`	`23`
`24`		`-`
`25`	`24`	`app = typer.Typer()`
`26`	`25`
`27`	`26`
Original file line number	Diff line number	Diff line change
`@@ -44,7 +44,6 @@`
`44`	`44`	`register_new_updatable_parameter,`
`45`	`45`	`)`
`46`	`46`
`47`		`-`
`48`	`47`	`# ============================================================================`
`49`	`48`	`# Classes from _likelihood.py`
`50`	`49`	`# ============================================================================`
Original file line number	Diff line number	Diff line change
`@@ -25,7 +25,6 @@`
`25`	`25`	`UpdatableCollection,`
`26`	`26`	`)`
`27`	`27`
`28`		`-`
`29`	`28`	`NUMBER_COUNTS_DEFAULT_BIAS = 1.5`
`30`	`29`
`31`	`30`