add job.output feature

Author: akashdhruv

jobrunner/cli/_commands.py

@@ -64,7 +64,7 @@ def setup(workdir_list, show):
 
             # Run setup
             print(f"Running setup")
-            subprocess.run(f"bash job.setup", shell=True, check=True)
+            subprocess.run(f"bash job.setup | tee job.output", shell=True, check=True)
 
         # Return to base directory
         os.chdir(basedir)
@@ -199,6 +199,12 @@ def clean(workdir_list):
             check=True,
         )
 
+        process = subprocess.run(
+            f'rm -vf {workdir + "/" + "job.output"}',
+            shell=True,
+            check=True,
+        )
+
 
 @jobrunner.command(name="archive")
 @click.option(

jobrunner/lib/_archivetools.py

@@ -56,6 +56,7 @@ def CreateArchive(main_dict, archive_tag):
                 nodedir + os.sep + "job.input",
                 nodedir + os.sep + "job.setup",
                 nodedir + os.sep + "job.submit",
+                nodedir + os.sep + "job.output",
             ]
 
             # loop over list of files in nodedir