|
| 1 | +{ |
| 2 | + "schemaVersion": 1, |
| 3 | + "workspace": { |
| 4 | + "version": "1.0.0", |
| 5 | + "lastModified": "2023-06-22T12:00:00.000Z", |
| 6 | + "animals": { |
| 7 | + "remy": { |
| 8 | + "id": "remy", |
| 9 | + "subject": { |
| 10 | + "description": "Long Evans Rat from Charles River", |
| 11 | + "genotype": "Wild Type", |
| 12 | + "species": "Rattus norvegicus", |
| 13 | + "sex": "M", |
| 14 | + "subject_id": "remy", |
| 15 | + "weight": 485, |
| 16 | + "date_of_birth": "2023-01-10T00:00:00" |
| 17 | + }, |
| 18 | + "devices": { |
| 19 | + "data_acq_device": [ |
| 20 | + { "name": "SpikeGadgets", "system": "SpikeGadgets", "amplifier": "Intan", "adc_circuit": "Intan" } |
| 21 | + ], |
| 22 | + "device": { "name": ["Trodes"] }, |
| 23 | + "electrode_groups": [ |
| 24 | + { "id": 0, "location": "CA1", "device_type": "tetrode_12.5", "description": "CA1 tetrode 1", "targeted_location": "CA1", "targeted_x": 3, "targeted_y": 2.5, "targeted_z": 2, "units": "mm" }, |
| 25 | + { "id": 1, "location": "CA1", "device_type": "tetrode_12.5", "description": "CA1 tetrode 2", "targeted_location": "CA1", "targeted_x": 3.1, "targeted_y": 2.5, "targeted_z": 2, "units": "mm" } |
| 26 | + ], |
| 27 | + "ntrode_electrode_group_channel_map": [ |
| 28 | + { "ntrode_id": 1, "electrode_group_id": 0, "bad_channels": [], "map": { "0": 0, "1": 1, "2": 2, "3": 3 } }, |
| 29 | + { "ntrode_id": 2, "electrode_group_id": 1, "bad_channels": [2], "map": { "0": 0, "1": 1, "2": 2, "3": 3 } } |
| 30 | + ] |
| 31 | + }, |
| 32 | + "cameras": [ |
| 33 | + { "id": 0, "meters_per_pixel": 0.00085, "manufacturer": "Allied Vision", "model": "Mako G-158", "lens": "Fujinon HF16HA-1B", "camera_name": "overhead_camera" } |
| 34 | + ], |
| 35 | + "experimenters": { |
| 36 | + "experimenter_name": ["Guidera, Jennifer"], |
| 37 | + "lab": "Frank", |
| 38 | + "institution": "University of California, San Francisco" |
| 39 | + }, |
| 40 | + "optogenetics": null, |
| 41 | + "behavioral_events": [], |
| 42 | + "days": ["remy-2023-06-22"], |
| 43 | + "created": "2023-06-22T12:00:00.000Z", |
| 44 | + "lastModified": "2023-06-22T12:00:00.000Z", |
| 45 | + "configurationHistory": [ |
| 46 | + { |
| 47 | + "version": 1, |
| 48 | + "date": "2023-06-22", |
| 49 | + "description": "Initial configuration", |
| 50 | + "devices": { |
| 51 | + "electrode_groups": [ |
| 52 | + { "id": 0, "location": "CA1", "device_type": "tetrode_12.5", "description": "CA1 tetrode 1", "targeted_location": "CA1", "targeted_x": 3, "targeted_y": 2.5, "targeted_z": 2, "units": "mm" }, |
| 53 | + { "id": 1, "location": "CA1", "device_type": "tetrode_12.5", "description": "CA1 tetrode 2", "targeted_location": "CA1", "targeted_x": 3.1, "targeted_y": 2.5, "targeted_z": 2, "units": "mm" } |
| 54 | + ], |
| 55 | + "ntrode_electrode_group_channel_map": [ |
| 56 | + { "ntrode_id": 1, "electrode_group_id": 0, "bad_channels": [], "map": { "0": 0, "1": 1, "2": 2, "3": 3 } }, |
| 57 | + { "ntrode_id": 2, "electrode_group_id": 1, "bad_channels": [2], "map": { "0": 0, "1": 1, "2": 2, "3": 3 } } |
| 58 | + ] |
| 59 | + }, |
| 60 | + "appliedToDays": [] |
| 61 | + } |
| 62 | + ] |
| 63 | + } |
| 64 | + }, |
| 65 | + "days": { |
| 66 | + "remy-2023-06-22": { |
| 67 | + "id": "remy-2023-06-22", |
| 68 | + "animalId": "remy", |
| 69 | + "date": "2023-06-22", |
| 70 | + "experimentDate": "06222023", |
| 71 | + "session": { |
| 72 | + "session_id": "remy_20230622", |
| 73 | + "session_description": "Day 45 of chronic recording, W-track alternation", |
| 74 | + "experiment_description": "Chronic tetrode recording during spatial navigation" |
| 75 | + }, |
| 76 | + "tasks": [ |
| 77 | + { "task_name": "sleep", "task_description": "Rest in home cage", "task_environment": "home cage", "camera_id": [0], "task_epochs": [1] } |
| 78 | + ], |
| 79 | + "behavioral_events": [ |
| 80 | + { "description": "Reward delivery at left arm", "name": "reward_left" } |
| 81 | + ], |
| 82 | + "associated_files": [], |
| 83 | + "associated_video_files": [], |
| 84 | + "technical": { |
| 85 | + "times_period_multiplier": 1.5, |
| 86 | + "raw_data_to_volts": 0.195, |
| 87 | + "default_header_file_path": "" |
| 88 | + }, |
| 89 | + "state": { "draft": true, "validated": false, "exported": false }, |
| 90 | + "created": "2023-06-22T12:00:00.000Z", |
| 91 | + "lastModified": "2023-06-22T12:00:00.000Z", |
| 92 | + "configurationVersion": 1 |
| 93 | + } |
| 94 | + }, |
| 95 | + "settings": { |
| 96 | + "defaultLab": "Frank", |
| 97 | + "defaultInstitution": "University of California, San Francisco", |
| 98 | + "defaultExperimenters": ["Guidera, Jennifer"], |
| 99 | + "autoSaveInterval": 30000, |
| 100 | + "shadowExportEnabled": true |
| 101 | + } |
| 102 | + } |
| 103 | +} |
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