Update waveform_features.py (#813)

MichaelCoulter · edeno · web-flow · commit 5842ba6c830e · 2024-02-09T07:55:55.000-08:00
* Update waveform_features.py

i updated the default parameters. i think chunk_duration is needed for spike interface to use the n_jobs keyword. this allows parallelization for waveform extraction

* Fix linting

---------

Co-authored-by: Eric Denovellis &lt;edeno@bu.edu&gt;
diff --git a/src/spyglass/decoding/v1/waveform_features.py b/src/spyglass/decoding/v1/waveform_features.py
@@ -37,7 +37,7 @@ class WaveformFeaturesParams(SpyglassMixin, dj.Lookup):
         "ms_after": 0.5,
         "max_spikes_per_unit": None,
         "n_jobs": 5,
-        "total_memory": "5G",
+        "chunk_duration": "1000s",
     }
     contents = [
         [

Original file line number	Diff line number	Diff line change
`@@ -37,7 +37,7 @@ class WaveformFeaturesParams(SpyglassMixin, dj.Lookup):`
`37`	`37`	`"ms_after": 0.5,`
`38`	`38`	`"max_spikes_per_unit": None,`
`39`	`39`	`"n_jobs": 5,`
`40`		`- "total_memory": "5G",`
	`40`	`+ "chunk_duration": "1000s",`
`41`	`41`	`}`
`42`	`42`	`contents = [`
`43`	`43`	`[`