starting over

Author: Carly Lovas

scratch.R R/scratch.Rscratch.R renamed to R/scratch.R

@@ -8,12 +8,11 @@ output: github_document
 #| echo: false
 knitr::opts_chunk$set(
   collapse = TRUE,
-  comment = "#>",
-  fig.path = "images/package_"
+  comment = "#>"
 )
 ```
 
-# species.shifts <img src="vignettes/images/package_hex.svg" align="left" height="138" /></a>
+# species.shifts <img src="images/package_hex.svg" align="left" height="138" /></a>
 
 <!-- badges: start -->
 
@@ -37,7 +36,7 @@ All three groups of functions will ultimately yield the materials needed to gene
 
 
 <p align="center">
-  <img src="vignettes/images/package_data_flow.svg">
+  <img src="images/package_data_flow.svg">
 </p>
 
 

README.Rmd

@@ -1,7 +1,7 @@
 
 <!-- README.md is generated from README.Rmd. Please edit that file -->
 
-# species.shifts <img src="vignettes/images/package_hex.svg" align="left" height="138" /></a>
+# species.shifts <img src="images/package_hex.svg" align="left" height="138" /></a>
 
 <!-- badges: start -->
 
@@ -49,7 +49,7 @@ independent data sets.
 
 <p align="center">
 
-<img src="vignettes/images/package_data_flow.svg">
+<img src="images/package_data_flow.svg">
 </p>
 
 ------------------------------------------------------------------------

README.md

@@ -0,0 +1,28 @@
+project:
+  type: website
+  output-dir: docs
+
+website:
+  title: "Northeast US Marine Species Distribution Shifts"
+  site-url: https://carlylovas.github.io/species.shifts/
+
+  navbar:
+    left:
+      - text: "Home"
+        href: index.qmd
+      - text: "Articles"
+        menu:
+          - text: "Accessing and cleaning federal fisheries data"
+            href: articles/data_cleaning_functions.qmd
+          - text: "Plotting federal fisheries data"
+            href: articles/plotting_functions.qmd
+      - text: "Reference"
+        href: reference/index.qmd
+    right:
+      - icon: github
+        href: https://github.com/carlylovas/species.shifts
+
+format:
+  html:
+    theme: cosmo
+    toc: true