.gitlab-ci.yml

variables:

  override_module_branch:
    value: ""
    description: "override the default branch for each Marmot module"

  # number of columns in the module definition matrix
  marmot_module_defintion_matrix_col_size: 3

  # additional core libraries
  # CoreModules:
      # repo name                 secret repo url                       default branch
    # value: |

  # additional element libraries
  # ElementModules:
      # repo name                 secret repo url                       default branch
    # value: |

  # additional material libraries
  MaterialModules:
      # repo name                 secret repo url                       default branch
    value: |

format:
  stage: .pre
  image: mambaorg/micromamba:latest
  needs: []
  rules:
    - when: always
  script:
    - micromamba install pre-commit git
    - git config --global --add safe.directory $CI_PROJECT_DIR
    - pre-commit install
    - pre-commit run --all

build:linux:
  stage: build
  image: debian:bookworm
  rules:
    - if: $CI_PIPELINE_SOURCE != 'merge_request_event'
  script:

    - function install_marmot_module(){
        repo_name=$1;
        repo_url=$2;
        repo_default_branch=$3;

        echo "installing module $repo_name with branch $repo_default_branch";

        rm -rf $repo_name;
        git clone --branch $repo_default_branch   $repo_url   $repo_name;

        if [ ! -z "$override_module_branch" ]; then
          echo "trying to check out branch $override_module_branch" ;
          cd $repo_name;
          git checkout $override_module_branch || echo "branch $module_branch not available for $repo_name" ;
          cd ../ ;
        fi; }

    - function install_marmot_modules(){
        modules=("$@");
        for (( i=0; i<${#modules[@]}; i+=(($marmot_module_defintion_matrix_col_size)) ));
        do
          install_marmot_module ${modules[@]:$i:$marmot_module_defintion_matrix_col_size};
        done; }

    - apt-get update -y
    - apt-get upgrade -y
    - apt-get install -y wget cmake git libtbbmalloc2 build-essential gfortran

    - git clone -b 3.4.0 https://gitlab.com/libeigen/eigen.git
    - cd eigen
    - mkdir build
    - cd build
    - cmake -DBUILD_TESTING=OFF ..
    - make install
    - cd ../..

    - git clone -b v1.1.0 https://github.com/autodiff/autodiff.git
    - cd autodiff
    - mkdir build
    - cd build
    - cmake -DAUTODIFF_BUILD_TESTS=OFF -DAUTODIFF_BUILD_PYTHON=OFF -DAUTODIFF_BUILD_EXAMPLES=OFF -DAUTODIFF_BUILD_DOCS=OFF ..
    - make install
    - cd ../..

    - git clone https://github.com/romeric/Fastor.git
    - cd Fastor
    - mkdir build
    - cd build
    - cmake -DBUILD_TESTING=OFF ..
    - make install
    - cd ../..

#    - cd modules/core
#    - install_marmot_modules ${CoreModules[@]}
#    - cd ../..

#    - cd modules/elements
#    - install_marmot_modules ${ElementModules[@]}
#    - cd ../..

    - cd modules/materials
    - install_marmot_modules ${MaterialModules[@]}
    - cd ../..

    - mkdir build
    - cd build
    - cmake ..
    - make install
    - ctest

build and test with edelweiss:
  stage: test
  image: mambaorg/micromamba:latest
  only: [merge_requests]
  script:
    - function install_marmot_module(){
        repo_name=$1;
        repo_url=$2;
        repo_default_branch=$3;

        echo "installing module $repo_name with branch $repo_default_branch";

        rm -rf $repo_name;
        git clone --branch $repo_default_branch   $repo_url   $repo_name;

        if [ ! -z "$override_module_branch" ]; then
          echo "trying to check out branch $override_module_branch" ;
          cd $repo_name;
          git checkout $override_module_branch || echo "branch $module_branch not available for $repo_name" ;
          cd ../ ;
        fi; }

    - function install_marmot_modules(){
        modules=("$@");
        for (( i=0; i<${#modules[@]}; i+=(($marmot_module_defintion_matrix_col_size)) ));
        do
          install_marmot_module ${modules[@]:$i:$marmot_module_defintion_matrix_col_size};
        done; }

    - micromamba install python=3.12
    - micromamba install git
    - git clone https://github.com/EdelweissFE/EdelweissFE.git
    - micromamba install -c conda-forge --file EdelweissFE/requirements.txt

    - git clone -b 3.4.0 https://gitlab.com/libeigen/eigen.git
    - cd eigen
    - mkdir build
    - cd build
    - cmake -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=$(python -c "import sys; print(sys.prefix)") ..
    - make install
    - cd ../..

    - git clone -b v1.1.0 https://github.com/autodiff/autodiff.git
    - cd autodiff
    - mkdir build
    - cd build
    - cmake -DCMAKE_INSTALL_PREFIX=$(python -c "import sys; print(sys.prefix)") -DAUTODIFF_BUILD_TESTS=OFF -DAUTODIFF_BUILD_PYTHON=OFF -DAUTODIFF_BUILD_EXAMPLES=OFF -DAUTODIFF_BUILD_DOCS=OFF ..
    - make install
    - cd ../..

    - git clone https://github.com/romeric/Fastor.git
    - cd Fastor
    - mkdir build
    - cd build
    - cmake -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=$(python -c "import sys; print(sys.prefix)") ..
    - make install
    - cd ../..

#    - cd modules/core
#    - install_marmot_modules ${CoreModules[@]}
#    - cd ../..

#    - cd modules/elements
#    - install_marmot_modules ${ElementModules[@]}
#    - cd ../..

    - cd modules/materials
    - install_marmot_modules ${MaterialModules[@]}
    - cd ../..

    - mkdir build
    - cd build
    - cmake -DCMAKE_INSTALL_PREFIX=$(python -c "import sys; print(sys.prefix)") ..
    - make install
    - ctest
    - cd ..
    # build and test EdelweissFE
    - cd EdelweissFE
    - python -m pip install .
    - run_tests_edelweissfe testfiles/