@@ -162,22 +162,22 @@ First, pull the container:
162162
163163``` bash
164164# CPU-only build
165- docker pull ghcr.io/becksteinlab/streaming-md-docker:main-Common-CPU
165+ docker pull ghcr.io/becksteinlab/streaming-md-docker:main-common-cpu
166166
167167# CUDA build
168- docker pull ghcr.io/becksteinlab/streaming-md-docker:main-Common-GPU
168+ docker pull ghcr.io/becksteinlab/streaming-md-docker:main-common-gpu
169169```
170170
171171To run GROMACS, do:
172172
173173``` bash
174174# CPU
175175docker run -v /path/to/input/files:/home/conda:rw -p 8889:8889 \
176- ghcr.io/becksteinlab/streaming-md-docker:main-Common-CPU bash -c ' gmx <cmd>'
176+ ghcr.io/becksteinlab/streaming-md-docker:main-common-cpu bash -c ' gmx <cmd>'
177177
178178# GPU
179179docker run -v /path/to/input/files:/home/conda:rw --runtime=nvidia --gpus=all -p 8889:8889 \
180- ghcr.io/becksteinlab/streaming-md-docker:main-Common-GPU bash -c ' gmx <cmd>'
180+ ghcr.io/becksteinlab/streaming-md-docker:main-common-gpu bash -c ' gmx <cmd>'
181181```
182182
183183#### From source
@@ -219,22 +219,22 @@ First, pull the container:
219219
220220``` bash
221221# CPU-only build
222- docker pull ghcr.io/becksteinlab/streaming-md-docker:main-Common-CPU
222+ docker pull ghcr.io/becksteinlab/streaming-md-docker:main-common-cpu
223223
224224# CUDA build
225- docker pull ghcr.io/becksteinlab/streaming-md-docker:main-Common-GPU
225+ docker pull ghcr.io/becksteinlab/streaming-md-docker:main-common-gpu
226226```
227227
228228To run LAMMPS, do:
229229
230230``` bash
231231# CPU
232232docker run -v /path/to/input/files:/home/conda:rw -p 8889:8889 \
233- ghcr.io/becksteinlab/streaming-md-docker:main-Common-CPU bash -c ' lmp < </path/to/infile>'
233+ ghcr.io/becksteinlab/streaming-md-docker:main-common-cpu bash -c ' lmp < </path/to/infile>'
234234
235235# GPU
236236docker run -v /path/to/input/files:/home/conda:rw --runtime=nvidia --gpus=all -p 8889:8889 \
237- ghcr.io/becksteinlab/streaming-md-docker:main-Common-GPU bash -c ' lmp < </path/to/infile>'
237+ ghcr.io/becksteinlab/streaming-md-docker:main-common-gpu bash -c ' lmp < </path/to/infile>'
238238```
239239
240240#### From source
@@ -307,4 +307,4 @@ IMDsendForces yes
307307IMDwrapPositions yes
308308```
309309
310- When ` IMDversion ` is set to 2, the new options (` IMDsendTime ` , ` IMDsendBoxDimensions ` , ` IMDsendVelocities ` , ` IMDsendForces ` , ` IMDwrapPositions ` ) will have no effect.
310+ When ` IMDversion ` is set to 2, the new options (` IMDsendTime ` , ` IMDsendBoxDimensions ` , ` IMDsendVelocities ` , ` IMDsendForces ` , ` IMDwrapPositions ` ) will have no effect.
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