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GH Actions CI #232

Triggered via schedule May 3, 2026 00:44
Status Failure
Total duration 5m 9s
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gh-ci.yaml

on: schedule
pylint_check
39s
pylint_check
pypi_check
23s
pypi_check
Matrix: main-tests
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32 errors and 95 warnings
main-tests (ubuntu-latest, 3.13, develop)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.12, latest)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.12, develop)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.14, develop)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.12, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.12, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.14, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.11, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.13, latest)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.11, develop)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.11, latest)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.14, latest)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.11, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.11, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.14, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (windows-latest, 3.11, develop)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.12, latest)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.14, develop)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.12, develop)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.14, latest)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.13, develop)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (windows-latest, 3.13, latest)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (macos-latest, 3.13, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.13, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (windows-latest, 3.11, latest)
The process 'C:\Users\runneradmin\miniconda3\condabin\mamba.bat' failed with exit code 1
main-tests (macos-15-intel, 3.11, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-latest, 3.13, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.12, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.14, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.12, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.14, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (macos-15-intel, 3.13, latest)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.13, develop)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.13, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, latest)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.12, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, develop)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.12, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.14, develop)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.14, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.12, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.12, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.14, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.11, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.13, latest)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.13, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, develop)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.11, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, latest)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.11, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.14, latest)
critical libmamba Could not solve for environment specs
main-tests (ubuntu-latest, 3.14, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (ubuntu-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.11, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.11, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.14, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, develop)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.11, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, latest)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.12, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, develop)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.14, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, develop)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.12, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, latest)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.14, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, develop)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.13, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, latest)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.13, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.13, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.13, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.13, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, latest)
critical libmamba Could not solve for environment specs
main-tests (windows-latest, 3.11, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (windows-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.11, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-latest, 3.13, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.12, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.14, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.12, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, latest)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.14, latest)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); └─ mdanalysistests =* * does not exist (perhaps a typo or a missing channel).
main-tests (macos-15-intel, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.13, latest)
critical libmamba Multiple errors occurred: Download error (28) Timeout was reached [https://prefix.dev/conda-forge/noarch/repodata.json.zst] Connection timed out after 30000 milliseconds Subdir conda-forge/noarch not loaded! If you run into this error repeatedly, your package cache may be corrupted. Please try running `mamba clean -a` to remove this cache before retrying the operation. If you still are having issues, please report the error on `mamba-org/mamba`'s issue tracker: https://github.com/mamba-org/mamba/issues/new?assignees=&labels=&projects=&template=bug.yml
main-tests (macos-15-intel, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.