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GH Actions CI #244

Triggered via schedule July 5, 2026 00:43
Status Failure
Total duration 20m 57s
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gh-ci.yaml

on: schedule
pylint_check
39s
pylint_check
pypi_check
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pypi_check
Matrix: main-tests
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1 error, 69 warnings, and 8 notices
main-tests (macos-15-intel, 3.13, develop)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
main-tests (ubuntu-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (ubuntu-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (windows-latest, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.12, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.12, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.13, develop)
critical libmamba Could not solve for environment specs
main-tests (macos-15-intel, 3.13, develop)
error libmamba Could not solve for environment specs The following packages are incompatible ├─ codecov =* * is not installable because there are no viable options │ ├─ codecov [2.1.12|2.1.13] would require │ │ └─ python >=3.3 *, which does not exist (perhaps a missing channel); │ ├─ codecov 2.1.13 would require │ │ └─ python >=3.9 *, which does not exist (perhaps a missing channel); │ └─ codecov [2.0.15|2.0.18|...|2.1.9] would require │ └─ python =* *, which does not exist (perhaps a missing channel); ├─ cython =* * is not installable because there are no viable options │ ├─ cython 3.0.11 would require │ │ └─ python >=3.8 *, which does not exist (perhaps a missing channel); │ ├─ cython [3.0.12|3.1.0|3.1.1|3.1.2|3.1.3] would require │ │ └─ python >=3.9 *, which does not exist (perhaps a missing channel); │ └─ cython [3.1.4|3.1.5|...|3.2.8] would require │ └─ python >=3.10 *, which does not exist (perhaps a missing channel); ├─ joblib =* * is not installable because there are no viable options │ ├─ joblib [0.15.0|0.15.1|...|1.3.0] would require │ │ └─ python >=3.6 *, which does not exist (perhaps a missing channel); │ ├─ joblib [1.3.0|1.3.2] would require │ │ └─ python >=3.7 *, which does not exist (perhaps a missing channel); │ ├─ joblib [1.4.0|1.4.2] would require │ │ └─ python >=3.8 *, which does not exist (perhaps a missing channel); │ ├─ joblib [1.4.2|1.5.0|1.5.1] would require │ │ └─ python >=3.9 *, which does not exist (perhaps a missing channel); │ ├─ joblib [1.5.2|1.5.3] would require │ │ └─ python >=3.10 *, which does not exist (perhaps a missing channel); │ └─ joblib [0.12|0.12.1|...|0.14.1] would require │ └─ python =* *, which does not exist (perhaps a missing channel); ├─ mdanalysis =* * does not exist (perhaps a typo or a missing channel); ├─ mdanalysistests =* * is not installable because there are no viable options │ ├─ mdanalysistests 2.10.0 would require │ │ └─ mdanalysis ==2.10.0 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.4.1 would require │ │ └─ mdanalysis ==2.4.1 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.4.2 would require │ │ └─ mdanalysis ==2.4.2 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.4.3 would require │ │ └─ mdanalysis ==2.4.3 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.5.0 would require │ │ └─ mdanalysis ==2.5.0 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.6.1 would require │ │ └─ mdanalysis ==2.6.1 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.7.0 would require │ │ └─ mdanalysis ==2.7.0 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.8.0 would require │ │ └─ mdanalysis ==2.8.0 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.9.0 would require │ │ └─ mdanalysis ==2.9.0 *, which does not exist (perhaps a missing channel); │ ├─ mdanalysistests 2.2.0 would require │ │ └─ mdanalysis ==2.2.0 *, which does not exist (perhaps a missing channel); │ └─ mdanalysistests 2.3.0 would require │ └─ mdanalysis ==2.3.0 *, which does not exist (perhaps a missing channel); ├─ numpy =* * does not exist (perhaps a typo or a missing channel); ├─ pip =* * is not installable because there are no viable options │ ├─ pip [22.0|22.0.1|...|24.0] would require │ │ └─ python >=3.7 *, which does not exist (perhaps a missing channe
main-tests (macos-15-intel, 3.13, develop)
warning libmamba Failed to load subdir: Download error (28) Timeout was reached [https://prefix.dev/conda-forge/osx-64/repodata.json.zst] Resolving timed out after 30001 milliseconds
main-tests (macos-15-intel, 3.13, develop)
warning libmamba Download error (28) Timeout was reached [https://prefix.dev/conda-forge/noarch/repodata.json.zst] Resolving timed out after 30001 milliseconds warning libmamba Download error (28) Timeout was reached [https://prefix.dev/conda-forge/osx-64/repodata.json.zst] Resolving timed out after 30001 milliseconds
main-tests (macos-15-intel, 3.13, develop)
warning libmamba Download error (28) Timeout was reached [https://conda.anaconda.org/conda-forge/osx-64/repodata.json.zst] Resolving timed out after 30001 milliseconds
main-tests (macos-15-intel, 3.13, develop)
warning libmamba Download error (28) Timeout was reached [https://conda.anaconda.org/conda-forge/noarch/repodata.json.zst] Resolving timed out after 30001 milliseconds
main-tests (macos-15-intel, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.13, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.13, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.14, latest)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-15-intel, 3.11, develop)
`auto-activate-base` is deprecated. Please use `auto-activate`. If your installer does not use the `base` environment as the default environment, also add `activate-environment: base`.
main-tests (macos-latest, 3.11, latest)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.11, develop)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.12, develop)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.14, develop)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.13, latest)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.12, latest)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.14, latest)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167
main-tests (macos-latest, 3.13, develop)
The macos-latest label will migrate to macOS 26 beginning June 15, 2026. For more information see https://github.com/actions/runner-images/issues/14167