Skip to content

Navigation Menu

Appearance settings

View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
View all resources
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  Accelerator
  GitHub Stars
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Uh oh!

There was an error while loading. Please reload this page.

MDAnalysis / mdanalysis Public

Notifications You must be signed in to change notification settings
Fork 853
Star 1.6k

Code
Issues 440
Pull requests 96
Discussions
Actions
Projects
Wiki
Security and quality
Insights

Additional navigation options

Code
Issues
Pull requests
Discussions
Actions
Projects
Wiki
Security and quality
Insights

History / MDAnalysis 1.0 paper initial notes

Edit page New page

Revisions

link to SciPy paper

orbeckst committed Mar 4, 2021

cc6e584
Thoughts from @IAlibay

IAlibay committed Sep 30, 2020

247f2d0
Nature Methods

orbeckst committed Jul 19, 2020

17b8926
notes on interoperability

orbeckst committed Apr 9, 2020

975f8cb
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Nov 30, 2018

5ab8b29
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Sep 18, 2018

feb4463
sole citation

orbeckst committed Sep 18, 2018

b9ed0f1
Updated MDAnalysis 1.0 paper initial notes (markdown)

richardjgowers committed Aug 22, 2018

bec42d3
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Aug 21, 2018

20fef50
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Aug 21, 2018

1b0b8cc
manually added level-1 ToC

orbeckst committed Aug 21, 2018

2575c16
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Aug 21, 2018

ee8c47e
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Aug 14, 2018

4a7cdcc
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Aug 14, 2018

23c6b7e
examples for different authorship models

orbeckst committed Aug 14, 2018

65bdbed
choose optimal algorithm

orbeckst committed Aug 14, 2018

8897fd4
more content

orbeckst committed Jul 20, 2018

7e7b600
Updated MDAnalysis 1.0 paper initial notes (markdown)

orbeckst committed Jul 20, 2018

5febbdf
notes for MDA v1.0 paper

orbeckst committed Jul 20, 2018

4a6243a

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.