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Updates for DOLfYN: improved handling of "averaged" profiles, ADCP waves example, critical PSD bugfix #1453

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Updates for DOLfYN: improved handling of "averaged" profiles, ADCP waves example, critical PSD bugfix

Updates for DOLfYN: improved handling of "averaged" profiles, ADCP waves example, critical PSD bugfix #1453

Triggered via pull request December 10, 2025 23:53
@jmcvey3jmcvey3
synchronize #430
jmcvey3:avg-profile-bugfixes
Status Success
Total duration 25m 29s
Artifacts 1

main.yml

on: pull_request
prepare-nonhindcast-cache
2m 56s
prepare-nonhindcast-cache
check-changes
19s
check-changes
set-os
3s
set-os
Test Built Wheel
1m 9s
Test Built Wheel
prepare-wave-hindcast-cache
0s
prepare-wave-hindcast-cache
Matrix: conda-build
Matrix: pip-build
Matrix: test-optional-pip-dependencies
prepare-wind-hindcast-cache
0s
prepare-wind-hindcast-cache
notebook-matrix
24s
notebook-matrix
Matrix: hindcast-calls
Matrix: test-notebooks
Indicate completion to coveralls.io
11s
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71 warnings
prepare-nonhindcast-cache
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
prepare-nonhindcast-cache
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/wave_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/wave_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/WPTO_hindcast_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/WPTO_hindcast_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/upcrossing_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/upcrossing_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/Delft3D_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/Delft3D_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/environmental_contours_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/environmental_contours_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/adv_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/adv_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/power_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/power_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/extreme_response_full_sea_state_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/extreme_response_full_sea_state_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/extreme_response_MLER_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/extreme_response_MLER_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/directional_waves.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/directional_waves.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/extreme_response_contour_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/extreme_response_contour_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/adcp_waves_example.ipynb, 60)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/adcp_waves_example.ipynb, 60)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/loads_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/loads_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
conda-ubuntu-latest/3.12
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
conda-ubuntu-latest/3.11
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/metocean_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/metocean_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/tidal_performance_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/tidal_performance_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/short_term_extremes_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/short_term_extremes_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
conda-ubuntu-latest/3.10
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/SWAN_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/SWAN_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/adcp_discharge_example.ipynb, 60)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/adcp_discharge_example.ipynb, 60)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/acoustics_example.ipynb, 60)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/acoustics_example.ipynb, 60)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/wecsim_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/wecsim_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/qc_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/qc_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/tidal_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/tidal_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/adcp_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/adcp_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/strain_measurement_example.ipynb, 30)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/strain_measurement_example.ipynb, 30)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/wecsim_power_performance_example.ipynb, 60)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/wecsim_power_performance_example.ipynb, 60)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/cdip_example.ipynb, 420)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/cdip_example.ipynb, 420)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/river_example.ipynb, 180)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/river_example.ipynb, 180)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/PacWave_resource_characterization_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/PacWave_resource_characterization_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/mooring_example.ipynb, 240)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/mooring_example.ipynb, 240)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
pip-ubuntu-latest/3.11
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
pip-ubuntu-latest/3.11
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
pip-ubuntu-latest/3.10
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
pip-ubuntu-latest/3.10
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
test-notebooks (examples/ADCP_Delft3D_TRTS_example.ipynb, 1200)
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
test-notebooks (examples/ADCP_Delft3D_TRTS_example.ipynb, 1200)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
pip-ubuntu-latest/3.12
WARNING conda.cli.main_config:_set_key(451): Key auto_activate_base is an alias of auto_activate; setting value with latter
pip-ubuntu-latest/3.12
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.

Artifacts

Produced during runtime
Name Size Digest
data
8.37 MB
sha256:b0c5a71e647cab8f8903c9578539af10c3e3d1a05381dc8b0941e7b8823b2fb9