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seaCell.yml
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name: seaCell
channels:
- nvidia
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- aiofiles=22.1.0=py39h06a4308_0
- aiosqlite=0.18.0=py39h06a4308_0
- anyio=3.5.0=py39h06a4308_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py39h7f8727e_0
- asttokens=2.0.5=pyhd3eb1b0_0
- attrs=22.1.0=py39h06a4308_0
- babel=2.11.0=py39h06a4308_0
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.12.2=py39h06a4308_0
- blas=1.0=mkl
- bleach=4.1.0=pyhd3eb1b0_0
- bottleneck=1.3.5=py39h7deecbd_0
- brotli=1.0.9=h5eee18b_7
- brotli-bin=1.0.9=h5eee18b_7
- brotlipy=0.7.0=py39h27cfd23_1003
- ca-certificates=2023.5.7=hbcca054_0
- certifi=2023.5.7=pyhd8ed1ab_0
- cffi=1.15.1=py39h5eee18b_3
- chardet=4.0.0=py39h06a4308_1003
- comm=0.1.2=py39h06a4308_0
- contourpy=1.0.5=py39hdb19cb5_0
- cryptography=39.0.1=py39h9ce1e76_2
- cuda-nvcc=12.2.91=0
- cudatoolkit=11.2.2=hbe64b41_10
- cudnn=8.1.0.77=h90431f1_0
- cycler=0.11.0=pyhd3eb1b0_0
- dbus=1.13.18=hb2f20db_0
- debugpy=1.5.1=py39h295c915_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- entrypoints=0.4=py39h06a4308_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.4.9=h6a678d5_0
- fontconfig=2.14.1=h52c9d5c_1
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.12.1=h4a9f257_0
- giflib=5.2.1=h5eee18b_3
- glib=2.69.1=he621ea3_2
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- icu=58.2=he6710b0_3
- idna=3.4=py39h06a4308_0
- importlib-metadata=6.0.0=py39h06a4308_0
- importlib_metadata=6.0.0=hd3eb1b0_0
- importlib_resources=5.2.0=pyhd3eb1b0_1
- intel-openmp=2023.1.0=hdb19cb5_46305
- ipykernel=6.19.2=py39hb070fc8_0
- ipython=8.12.0=py39h06a4308_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=8.0.4=py39h06a4308_0
- jedi=0.18.1=py39h06a4308_1
- jinja2=3.1.2=py39h06a4308_0
- joblib=1.2.0=py39h06a4308_0
- jpeg=9e=h5eee18b_1
- json5=0.9.6=pyhd3eb1b0_0
- jsonschema=4.17.3=py39h06a4308_0
- jupyter=1.0.0=py39h06a4308_8
- jupyter_client=8.1.0=py39h06a4308_0
- jupyter_console=6.6.3=py39h06a4308_0
- jupyter_core=5.3.0=py39h06a4308_0
- jupyter_events=0.6.3=py39h06a4308_0
- jupyter_server=2.5.0=py39h06a4308_0
- jupyter_server_fileid=0.9.0=py39h06a4308_0
- jupyter_server_terminals=0.4.4=py39h06a4308_1
- jupyter_server_ydoc=0.8.0=py39h06a4308_1
- jupyter_ydoc=0.2.4=py39h06a4308_0
- jupyterlab=3.6.3=py39h06a4308_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.22.0=py39h06a4308_0
- jupyterlab_widgets=3.0.5=py39h06a4308_0
- kiwisolver=1.4.4=py39h6a678d5_0
- krb5=1.20.1=h143b758_1
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- lerc=3.0=h295c915_0
- libbrotlicommon=1.0.9=h5eee18b_7
- libbrotlidec=1.0.9=h5eee18b_7
- libbrotlienc=1.0.9=h5eee18b_7
- libdeflate=1.17=h5eee18b_0
- libedit=3.1.20221030=h5eee18b_0
- libevent=2.1.12=hdbd6064_1
- libffi=3.4.4=h6a678d5_0
- libgcc-ng=11.2.0=h1234567_1
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libgomp=11.2.0=h1234567_1
- libllvm10=10.0.1=hbcb73fb_5
- libpng=1.6.39=h5eee18b_0
- libpq=12.15=hdbd6064_1
- libsodium=1.0.18=h7b6447c_0
- libstdcxx-ng=11.2.0=h1234567_1
- libtiff=4.5.0=h6a678d5_2
- libuuid=1.41.5=h5eee18b_0
- libwebp=1.2.4=h11a3e52_1
- libwebp-base=1.2.4=h5eee18b_1
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=hfa300c1_0
- libxml2=2.9.14=h74e7548_0
- libxslt=1.1.35=h4e12654_0
- lxml=4.9.1=py39h1edc446_0
- lz4-c=1.9.4=h6a678d5_0
- markupsafe=2.1.1=py39h7f8727e_0
- matplotlib-inline=0.1.6=py39h06a4308_0
- mistune=0.8.4=py39h27cfd23_1000
- mkl=2023.1.0=h6d00ec8_46342
- mkl-service=2.4.0=py39h5eee18b_1
- mkl_fft=1.3.6=py39h417a72b_1
- mkl_random=1.2.2=py39h417a72b_1
- mscorefonts=0.0.1=3
- munkres=1.1.4=py_0
- nbclassic=0.5.5=py39h06a4308_0
- nbclient=0.5.13=py39h06a4308_0
- nbconvert=6.5.4=py39h06a4308_0
- nbformat=5.7.0=py39h06a4308_0
- ncurses=6.4=h6a678d5_0
- nest-asyncio=1.5.6=py39h06a4308_0
- notebook=6.5.4=py39h06a4308_0
- notebook-shim=0.2.2=py39h06a4308_0
- nspr=4.35=h6a678d5_0
- nss=3.89.1=h6a678d5_0
- numexpr=2.8.4=py39hc78ab66_1
- openssl=3.0.9=h7f8727e_0
- packaging=23.0=py39h06a4308_0
- pandas=1.5.3=py39h417a72b_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- pcre=8.45=h295c915_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=9.4.0=py39h6a678d5_0
- pip=23.1.2=py39h06a4308_0
- platformdirs=2.5.2=py39h06a4308_0
- ply=3.11=py39h06a4308_0
- prometheus_client=0.14.1=py39h06a4308_0
- prompt-toolkit=3.0.36=py39h06a4308_0
- prompt_toolkit=3.0.36=hd3eb1b0_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.15.1=py39h06a4308_1
- pyopenssl=23.0.0=py39h06a4308_0
- pyparsing=3.0.9=py39h06a4308_0
- pyqt=5.15.7=py39h6a678d5_1
- pyqt5-sip=12.11.0=py39h6a678d5_1
- pyrsistent=0.18.0=py39heee7806_0
- pysocks=1.7.1=py39h06a4308_0
- python=3.9.17=h955ad1f_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py39h06a4308_0
- python-json-logger=2.0.7=py39h06a4308_0
- pytz=2022.7=py39h06a4308_0
- pyyaml=6.0=py39h5eee18b_1
- pyzmq=25.1.0=py39h6a678d5_0
- qt-main=5.15.2=h327a75a_7
- qt-webengine=5.15.9=hd2b0992_4
- qtconsole=5.4.2=py39h06a4308_0
- qtpy=2.2.0=py39h06a4308_0
- qtwebkit=5.212=h4eab89a_4
- readline=8.2=h5eee18b_0
- rfc3339-validator=0.1.4=py39h06a4308_0
- rfc3986-validator=0.1.1=py39h06a4308_0
- scikit-learn=1.2.2=py39h6a678d5_1
- seaborn=0.12.2=py39h06a4308_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=67.8.0=py39h06a4308_0
- sip=6.6.2=py39h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- sniffio=1.2.0=py39h06a4308_1
- soupsieve=2.4=py39h06a4308_0
- sqlite=3.41.2=h5eee18b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- tbb=2021.8.0=hdb19cb5_0
- terminado=0.17.1=py39h06a4308_0
- threadpoolctl=2.2.0=pyh0d69192_0
- tinycss2=1.2.1=py39h06a4308_0
- tk=8.6.12=h1ccaba5_0
- toml=0.10.2=pyhd3eb1b0_0
- tomli=2.0.1=py39h06a4308_0
- tornado=6.2=py39h5eee18b_0
- tqdm=4.65.0=py39hb070fc8_0
- traitlets=5.7.1=py39h06a4308_0
- tzdata=2023c=h04d1e81_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py39h06a4308_1
- websocket-client=0.58.0=py39h06a4308_4
- wheel=0.38.4=py39h06a4308_0
- widgetsnbextension=4.0.5=py39h06a4308_0
- xz=5.4.2=h5eee18b_0
- y-py=0.5.9=py39h52d8a92_0
- yaml=0.2.5=h7b6447c_0
- ypy-websocket=0.8.2=py39h06a4308_0
- zeromq=4.3.4=h2531618_0
- zipp=3.11.0=py39h06a4308_0
- zlib=1.2.13=h5eee18b_0
- zstd=1.5.5=hc292b87_0
- pip:
- absl-py==1.4.0
- anndata==0.9.1
- array-record==0.4.0
- astunparse==1.6.3
- blosc2==2.0.0
- cachetools==5.3.1
- charset-normalizer==3.2.0
- check-shapes==1.0.0
- click==8.1.5
- cloudpickle==2.2.1
- cmake==3.26.4
- cython==0.29.36
- deprecated==1.2.14
- dm-tree==0.1.8
- etils==1.3.0
- fcsparser==0.2.6
- flatbuffers==23.5.26
- gast==0.4.0
- google-auth==2.22.0
- google-auth-oauthlib==1.0.0
- google-pasta==0.2.0
- googleapis-common-protos==1.59.1
- gpflow==2.8.1
- gpflux==0.4.2
- grpcio==1.56.0
- gseapy==1.1.3
- h5py==3.9.0
- igraph==0.10.6
- jax==0.4.13
- jaxlib==0.4.13
- jaxopt==0.7
- keras==2.12.0
- lark==1.1.5
- leidenalg==0.10.0
- libclang==16.0.6
- llvmlite==0.40.1
- markdown==3.4.3
- matplotlib==3.7.2
- mellon==1.3.1
- ml-dtypes==0.2.0
- msgpack==1.0.5
- mudata==0.2.3
- multipledispatch==1.0.0
- muon==0.1.6
- natsort==8.4.0
- ncls==0.0.68
- networkx==3.1
- numba==0.57.1
- numpy==1.24.3
- nvidia-cublas-cu12==12.2.1.16
- nvidia-cuda-runtime-cu12==12.2.53
- nvidia-cudnn-cu12==8.9.2.26
- nvidia-pyindex==1.0.9
- nvidia-tensorrt==99.0.0
- oauthlib==3.2.2
- opt-einsum==3.3.0
- palantir==1.3.0
- patsy==0.5.3
- progressbar2==4.2.0
- promise==2.3
- protobuf==4.23.4
- psutil==5.9.5
- py-cpuinfo==9.0.0
- pyasn1==0.5.0
- pyasn1-modules==0.3.0
- pygam==0.9.0
- pynndescent==0.5.10
- pyppca==0.0.4
- pyranges==0.0.129
- python-utils==3.7.0
- requests==2.31.0
- requests-oauthlib==1.3.1
- rsa==4.9
- scanpy==1.9.3
- scipy==1.11.1
- seacells==0.3.3
- session-info==1.0.0
- sorted-nearest==0.0.39
- statsmodels==0.14.0
- stdlib-list==0.9.0
- tables==3.8.0
- tabulate==0.9.0
- tensorboard==2.12.3
- tensorboard-data-server==0.7.1
- tensorflow==2.12.1
- tensorflow-datasets==4.9.2
- tensorflow-estimator==2.12.0
- tensorflow-io-gcs-filesystem==0.32.0
- tensorflow-metadata==1.13.1
- tensorflow-probability==0.19.0
- tensorrt==8.6.1
- tensorrt-bindings==8.6.1
- tensorrt-libs==8.6.1
- termcolor==2.3.0
- texttable==1.6.7
- typing-extensions==4.7.1
- tzlocal==5.0.1
- umap-learn==0.5.3
- urllib3==2.0.3
- werkzeug==2.3.6
- wrapt==1.14.1
prefix: /home/zmoslehi/miniconda3/envs/seaCell