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CLI Tool Commands & Core Refactoring #413

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Run time

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Job	Run time
Pixi lock	12s
pre-commit	3m 45s
pytest (py312, windows-latest)	4m 6s
pytest (py312, macos-latest)	4m 0s
Setup workflow	6s
pytest (py311, windows-latest)	2m 36s
pytest (py311, ubuntu-latest)	2m 36s
pytest (py311, macos-latest)	2m 41s
pytest (py312, ubuntu-latest)	3m 55s
ui:test-ui:windows-latest	3m 0s
ui:test-ui:ubuntu-latest	35s
ui:test-ui:macos-latest	1m 29s
	29m 1s