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Reduced-unit profiles for NpT runs and freud integration #480

Reduced-unit profiles for NpT runs and freud integration

Reduced-unit profiles for NpT runs and freud integration #480

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on: [ push ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"]
include:
- python-version: "3.10"
numpy-version: "2.1.3"
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- if: ${{ matrix.numpy-version}}
run: python -m pip install numpy==${{ matrix.numpy-version }}
- name: Install dependencies for testing
run: |
python -m pip install --upgrade pip
if [ -f requirements.testing.txt ]; then pip install -r requirements.testing.txt; fi
python -m build
python -m pip install dist/*.whl
python -m pip install pytest pytest-cov
#- name: Lint with flake8
# run: |
# # stop the build if there are Python syntax errors or undefined names
# flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
# flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
pytest --cov=pytim --cov-report=xml
- name: Upload coverage reports to Codecov with GitHub Action
uses: codecov/codecov-action@v5
- name: Clone pytim-notebooks
run: |
git clone https://github.com/Marcello-Sega/pytim-notebooks.git
- name: Install dependencies for pytim-notebooks
run: |
cd pytim-notebooks
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Test pytim-notebooks
run: |
cd pytim-notebooks
IFS=$(echo -ne "\n\b") ;
for notebook in $(find . -name "*.ipynb"); do
base=$(basename "$notebook" .ipynb)
output="executed_${base}.ipynb"
echo "Running $notebook"
jupyter nbconvert --to notebook --execute "$notebook" --output "$output"
done