Do not use deprecated canonifyURLs (#129)

- this had some unwanted side effects
- adapt all URLs to work without the setting (remove /)
- do not use absolute links to the site URL

Author: mrbean-bremen

README.md

@@ -1,16 +1,14 @@
-# MeVisLab Examples
-
-This is the repository for the MeVisLab Examples GitHub pages.
-
-Please follow [Examples Pages](https://mevislab.github.io/examples/)
+# MeVisLab Tutorials and Examples
 
+This is the repository for the [MeVisLab Tutorials and Examples GitHub pages](https://mevislab.github.io/examples/).
 
 ## Configuration
 
 ### Local Deployment
-* Checkout code
+* Checkout the code
 * Install _extended_ hugo from the [Hugo Website](https://gohugo.io/)
 * Install npm e.g. from [npmjs Website](https://docs.npmjs.com/downloading-and-installing-node-js-and-npm)
-* Change to mevislab.github.io folder and run `npm install`
-* Stay in this folder and run `hugo server -d public --baseURL //localhost/examples/` (The `/examples/` path is locally not absolute necessary but it helps to find problems that might appear on the production website.)
-* Open in your favorite browser the given URL
+* Change to the *mevislab.github.io* folder and run `npm install`
+* Stay in this folder and run `hugo server -d public --baseURL //localhost/examples/` (the `/examples/` path is not needed, 
+  but it helps to find problems that might appear on the published website)
+* Open the given URL in your favorite browser 

mevislab.github.io/content/about/about.md

@@ -21,6 +21,6 @@ Hints common mistakes or steps you should consider beforehand.
 Keyboard shortcuts are incorporated like this:  {{< keyboard "CTRL" "ALT" "2" >}}.
 
 ## Networks
-The networks shown and used in the tutorials can be found in the [Examples](/examples) section of this page. 
+The networks shown and used in the tutorials can be found in the [Examples](examples) section of this page. 
 They are usually embedded like this:
 {{< networkfile "examples/data_objects/contours/example1/ContourExample1.mlab" >}}

mevislab.github.io/content/examples/basic_mechanisms/contour_filter/index.md

@@ -13,7 +13,7 @@ Additionally, the images are modified by a local macro module `Filter` and shown
 
 In order to display the same slice (unchanged and changed), the module `SyncFloat` is used to synchronize the field value *startSlice* in both viewers. The `SyncFloat` module duplicates the value *Float1* to the field *Float2*.
 
-![Screenshot](/examples/basic_mechanisms/contour_filter/image.png)
+![Screenshot](examples/basic_mechanisms/contour_filter/image.png)
 
 # Download
-You can download the example network [here](/examples/basic_mechanisms/contour_filter/ContourFilter.zip)
+You can download the example network [here](examples/basic_mechanisms/contour_filter/ContourFilter.zip)

mevislab.github.io/content/examples/basic_mechanisms/macro_modules_and_module_interaction/example1/index.md

@@ -16,7 +16,7 @@ In this example we update the *.script* file of the `Filter` module to display t
 Changes applied to fields in the macro module's panel are applied to their internal network as well.
 {{</alert>}}
 
-![Screenshot](/examples/basic_mechanisms/macro_modules_and_module_interaction/example1/image.png)
+![Screenshot](examples/basic_mechanisms/macro_modules_and_module_interaction/example1/image.png)
 
 # Download
-You can download the example network [here](/examples/basic_mechanisms/macro_modules_and_module_interaction/example1/FilterExample.zip)
+You can download the example network [here](examples/basic_mechanisms/macro_modules_and_module_interaction/example1/FilterExample.zip)

mevislab.github.io/content/examples/basic_mechanisms/macro_modules_and_module_interaction/example2/index.md

@@ -12,9 +12,9 @@ A new macro module `IsoCSOs` is created providing two viewers in its internal ne
 
 To showcase how Python functions can be implemented in MeVisLab and called from within a module, additional buttons to browse directories and create contours via the `CSOIsoGenerator` are added. Lastly, a field listener is implemented reacting to field changes by colorizing contours when the user hovers over them with the mouse. 
 
-![Screenshot](/examples/basic_mechanisms/macro_modules_and_module_interaction/example2/image2.png)
+![Screenshot](examples/basic_mechanisms/macro_modules_and_module_interaction/example2/image2.png)
 
-![Screenshot](/examples/basic_mechanisms/macro_modules_and_module_interaction/example2/image.png)
+![Screenshot](examples/basic_mechanisms/macro_modules_and_module_interaction/example2/image.png)
 
 # Download
-The files need to be added to a package. You can download the example network [here](/examples/basic_mechanisms/macro_modules_and_module_interaction/example2/ScriptingExample2.zip)
+The files need to be added to a package. You can download the example network [here](examples/basic_mechanisms/macro_modules_and_module_interaction/example2/ScriptingExample2.zip)

mevislab.github.io/content/examples/basic_mechanisms/viewer_application/index.md

@@ -7,7 +7,7 @@ category: "basic_mechanisms"
 # Example 3: Creating a Simple Application
 In this example, you will learn how to create a simple prototype application in MeVisLab including a user interface (UI) with 2D and 3D viewers.
 
-![Screenshot](/examples/basic_mechanisms/viewer_application/image.png)
+![Screenshot](examples/basic_mechanisms/viewer_application/image.png)
 
 # Download
-You can download the example network [here](/examples/basic_mechanisms/viewer_application/viewerexample.mlab)
+You can download the example network [here](examples/basic_mechanisms/viewer_application/viewerexample.mlab)

mevislab.github.io/content/examples/data_objects/contours/example1/index.md

@@ -9,7 +9,7 @@ Contours are stored as Contour Segmentation Objects (CSOs) in MeVisLab.
 This example highlights ways of creating CSOs using modules of the `SoCSOEditor` group.
 
 {{<alert class="info" caption="Info">}}
-You may want to look at the glossary entry on [*CSOs*](/glossary/#contour-segmented-objects).
+You may want to look at the glossary entry on [*CSOs*](glossary/#contour-segmented-objects).
 {{</alert>}}
 
 The `SoCSOEditor` module group contains several modules, some of which are listed right below:
@@ -32,12 +32,12 @@ Whenever Contour Segmentation Objects are created, they are temporarily stored b
 
 In this example, contours are created and colors and styles of these CSOs are customized by using the `SoCSOVisualizationSettings` module.
 
-![Screenshot](/examples/data_objects/contours/example1/image.png)
+![Screenshot](examples/data_objects/contours/example1/image.png)
 
 ## Summary
 + Contours are stored as their own abstract data type called Contour Segmentation Objects (often abbreviated to *CSO*).
 + The `SoCSO\*Editor` module group contains several useful modules to create, interact with or modify CSOs.
 + Created CSOs are temporarily stored and can be managed using the `CSOManager`.
 
 # Download
-The example network can be downloaded [here](/examples/data_objects/contours/example1/ContourExample1.mlab)
+The example network can be downloaded [here](examples/data_objects/contours/example1/ContourExample1.mlab)

mevislab.github.io/content/examples/data_objects/contours/example2/index.md

@@ -12,7 +12,7 @@ In this example, semi-automatic countours are created using the `SoCSOLiveWireEd
 
 Additional contours between the manually created ones are generated by the `CSOSliceInterpolator` and added to the `CSOManager`. Different groups of contours are created for the left and right lobe of the lung and colored respectively.
 
-![Screenshot](/examples/data_objects/contours/example2/image.png)
+![Screenshot](examples/data_objects/contours/example2/image.png)
 
 # Download
-You can download the example network [here](/examples/data_objects/contours/example2/ContourExample2.mlab)
+You can download the example network [here](examples/data_objects/contours/example2/ContourExample2.mlab)

mevislab.github.io/content/examples/data_objects/contours/example3/index.md

@@ -14,7 +14,7 @@ The module `VoxelizeCSO` is used to create a three-dimensional voxel mask of the
 
 Lastly, the panel of the `View3D` module is used to visualize the voxel mask in 3D.
 
-![Screenshot](/examples/data_objects/contours/example3/image.png)
+![Screenshot](examples/data_objects/contours/example3/image.png)
 
 # Download
-You can download the example network [here](/examples/data_objects/contours/example3/ContourExample3.mlab)
+You can download the example network [here](examples/data_objects/contours/example3/ContourExample3.mlab)

mevislab.github.io/content/examples/data_objects/contours/example4/index.md

@@ -10,7 +10,7 @@ This example shows how to add annotations to an image.
 ## Summary
 In this example, the network of **Contour Example 3** is extended so that the volume of the 3D mask generated by the `VoxelizeCSO` module is calculated. The `CalculateVolume` module counts the number of voxels in the given mask and returns the correct volume in ml. The calculated volume will be used for a custom `SoView2DAnnotation` displayed in the `View2D`. 
 
-![Screenshot](/examples/data_objects/contours/example4/image.png)
+![Screenshot](examples/data_objects/contours/example4/image.png)
 
 # Download
-You can download the example network [here](/examples/data_objects/contours/example4/ContourExample4.mlab)
+You can download the example network [here](examples/data_objects/contours/example4/ContourExample4.mlab)