spectra from FPbase

[carandraug]

FPbase has a spectra and data for a bunch of proteins that we don't. We could have a script that downloads and converts it for spekcheck. Shouldn't be much work.

[carandraug]

I now wrote a quick script that does that. Given a file with all the FPbase protein data on json format, converts to SPEKcheck format and saves to a specific file. I also added a makefile rule that downloads said file.

Only two issues:

#. mKOκ protein has issues not sure exactly where. The last character is a kappa and so name is κ but κ is displayed. Not sure exactly where the issue is, but may be on spekcheck.js assuming simpler filenames.

#. the new script is python 3.7 only

[carandraug]

Spoke with Ian about including all the FPbase proteins on the next release. The problem with it is that it brings 244 fluorescent proteins which is a bit too much. Things we can do:

• mention the script on the README and tell users to download and copy the ones they want
• download them all, place them in a separate folder, and tell users to copy the ones they want
• put them all anyway and tell users to remove the ones they don't want