Bugfix tortuosity histograms (#20)

General:
- Updated copyright statement in all files by extending the year to 2019
- Updated version number to v4.0.2 in preparation for bugfix release
- Updated Changelog to reflect changes in this commit
- Updated Doxygen documentation using Doxygen v1.8.15
- Updated README to fix broken release badge

main:
- Corrected bug in tortuosity histogram output so that it now correctly outputs the data from the first bin
- Updated tortuosity histogram output by lowering the bin size to produce a high resolution histogram

test.pp:
- Added series of tests for new calculateProbablityHist function

Utils class:
- Added new calculateProbabilityHist function that allows the user to specify the bin positions
- Refactored calculateProbabilityHist functions to normalize using the size of the data vector instead of the separately counting the total number of data points

Author: MikeHeiber

.travis.yml

@@ -1,4 +1,4 @@
-# Copyright (c) 2014-2018 Michael C. Heiber
+# Copyright (c) 2014-2019 Michael C. Heiber
 # This source file is part of the Ising_OPV project, which is subject to the MIT License.
 # For more information, see the LICENSE file that accompanies this software.
 # The Ising_OPV project can be found on Github at https://github.com/MikeHeiber/Ising_OPV

CHANGELOG.md

@@ -8,6 +8,33 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [v4.0.2] - 2019-04-17 - Tortuosity Histogram Bugfix
+
+### Added
+- Utils (calculateProbabilityHist) - Added new overloaded function definition that allows users to specify the bin positions
+- test/test.cpp (CalculateProbabilityHistTests) - Added series of test for the new calculateProbabilityHist function with specified bin positions
+
+### Changed
+- .travis.yml - Extended copyright statement to 2019
+- Doxyfile - Updated project version to v4.0.2
+- docs - Updated documentation using updated Doxygen 1.8.15
+- LICENSE - Extended copyright statement to 2019
+- Lattice - Extended copyright statements to 2019
+- main.cpp - Extended copyright statement to 2019
+- main.cpp - Reduced the tortuosity histogram bin size from 0.02 to 0.01 to produce higher resolution data
+- Morphology - Extended copyright statements to 2019
+- Parameters - Extended copyright statements to 2019
+- Utils - Extended copyright statements to 2019
+- Utils (calculateProbabilityHist) - Refactored functions to use data vector size for normalization instead of unnecessarily counting 
+- Version - Extended copyright statements to 2019
+- Version - Updated Current_version namespace variable to v4.0.02
+- test/test.cpp - Extended copyright statement to 2019
+- test/test_mpi.cpp - Extended copyright statement to 2019
+
+### Fixed
+- main.cpp - Tortuosity histogram output so that the data from the first bin is now correctly output to the data file
+- README.md - Current status section to show latest stable release badge
+
 ## [v4.0.1] - 2018-12-12 - Tomogram Import Bugfix
 
 ### Added

Doxyfile

@@ -1,6 +1,6 @@
 The MIT License (MIT)
 
-Copyright (c) 2014-2018 Michael C. Heiber
+Copyright (c) 2014-2019 Michael C. Heiber
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

LICENSE

@@ -18,10 +18,9 @@ Generated or imported morphologies are then rigorously analyzed to determine imp
 
 ## Current Status
 
-v4.0 is now stable. 
-Please report any bugs or submit feature requests for future releases in the [Issues](https://github.com/MikeHeiber/Ising_OPV/issues) section. 
+Latest stable release: [![GitHub tag (latest SemVer)](https://img.shields.io/github/tag/MikeHeiber/Ising_OPV.svg)](https://github.com/MikeHeiber/Ising_OPV/releases)
 
-Latest release:  [![GitHub Pre-release](https://img.shields.io/github/release-pre/MikeHeiber/Ising_OPV/all.svg?style=flat-square)](https://github.com/MikeHeiber/Ising_OPV/releases)
+Please report any bugs or submit feature requests for future releases in the [Issues](https://github.com/MikeHeiber/Ising_OPV/issues) section. 
 
 To keep track of upcoming changes or review prior changes to the codebase, please see the [Changelog](./CHANGELOG.md).
 

README.md

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