Python version rebuild (#20)

* Temporarily deleted meta information

* Small changes in requirements.txt, added pre-commit

* MME, MPV restructured

* pre-commit style fix

* orth extraction utils, config skeleton

* Depth, Lidar, Custom configs

* Added config to metric function parameters

* Style fixes

* Added MAX_NN parameter to config

* Added min cluster size to config

* Parametrized functions with config

* Added pytest to requirements.txt

* Fixed relative imports

* More docstrings and formatting

* tests structure, metric tests

* package docs files

* formatter fixes

* style and tests CI

* Poetry files

* Small import update in __init__

* Massive tests update, small fixes in MOM

* test fixes

* removed poetry lock

* 0.0.4 version, docs fixes

Co-authored-by: Arthur_Ch <56088401+ArthurChains@users.noreply.github.com>

Author: achains

.editorconfig

@@ -0,0 +1,57 @@
+# This is a basic workflow to help you get started with Actions
+
+name: Code style
+
+# Controls when the workflow will run
+on:
+  # Triggers the workflow on push or pull request events
+  [ push, pull_request ]
+
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+
+  # This workflow contains a single job called "style"
+  style:
+
+    # The type of runner that the job will run on
+    runs-on: ubuntu-latest
+
+    # A strategy creates a build matrix for your jobs
+    strategy:
+
+      # You can define a matrix of different job configurations
+      matrix:
+
+        # Each option you define in the matrix has a key and value
+        python-version: [ 3.8 ]
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+      - name: Set up Git repository
+        uses: actions/checkout@v2
+
+      # Setup Python with version from matrix
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v2
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      # Install requirements
+      - name: Install requirements
+
+        # Runs command-line programs using the operating system's shell
+        run: |
+          python -m pip install --upgrade pip wheel setuptools
+          python -m pip install -r requirements.txt
+          python -m pip list
+
+      # Install pre-commit from .pre-commit-config.yaml
+      - name: Install pre-commit
+        run: |
+          pre-commit install
+
+      # Run pre-commit on all the files in the repo
+      - name: Run pre-commit
+        run: |
+          pre-commit run --all-files --color always --verbose --show-diff-on-failure

.github/style.yml

@@ -0,0 +1,52 @@
+# This is a basic workflow to help you get started with Actions
+
+name: Check tests
+
+# Controls when the workflow will run
+on:
+  # Triggers the workflow on push or pull request events
+  [ push, pull_request ]
+
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+
+  # This workflow contains a single job called "style"
+  build-and-test:
+
+    # The type of runner that the job will run on
+    runs-on: ${{ matrix.os }}
+
+    # A strategy creates a build matrix for your jobs
+    strategy:
+
+      # You can define a matrix of different job configurations
+      matrix:
+        os: [macos-latest, windows-latest, ubuntu-latest]
+
+        # Each option you define in the matrix has a key and value
+        python-version: [ 3.8 ]
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+      - name: Set up Git repository
+        uses: actions/checkout@v2
+
+      # Setup Python with version from matrix
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v2
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      # Install requirements
+      - name: Install requirements
+        shell: bash
+        # Runs command-line programs using the operating system's shell
+        run: |
+          python -m pip install --upgrade pip wheel setuptools
+          python -m pip install -r requirements.txt
+
+      # Run tests from /tests directory
+      - name: Run tests
+        run: |
+          python -m pytest

.github/tests.yml

@@ -24,6 +24,7 @@ wheels/
 *.egg-info/
 .installed.cfg
 *.egg
+poetry.lock
 
 # PyInstaller
 #  Usually these files are written by a python script from a template
@@ -102,4 +103,5 @@ ENV/
 .mypy_cache/
 
 # IDE settings
-.vscode/
+.vscode/
+.idea/

.gitignore

@@ -0,0 +1,12 @@
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v3.4.0
+    hooks:
+      - id: check-yaml
+      - id: end-of-file-fixer
+      - id: trailing-whitespace
+      - id: requirements-txt-fixer
+  - repo: https://github.com/psf/black
+    rev: 21.7b0
+    hooks:
+      - id: black

.pre-commit-config.yaml

@@ -1,6 +1,6 @@
 Apache Software License 2.0
 
-Copyright (c) 2021, Anastasiia Kornilova
+Copyright (c) 2022, Skolkovo Institute of Science and Technology (Skoltech)
 
 Licensed under the Apache License, Version 2.0 (the "License");
 you may not use this file except in compliance with the License.
@@ -13,4 +13,3 @@ distributed under the License is distributed on an "AS IS" BASIS,
 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 See the License for the specific language governing permissions and
 limitations under the License.
-