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Some ideas from Dorrestein Lab #3

@lfnothias

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@lfnothias

Hi Ivan,

We were having an Optimus training today, and here few comments/idea that came up with the group:

  • It would very convenient to have the BLANK field in the experimental design, automatically populated by the group mapping file.
  • Regarding the feature_quantification_matrix.csv, it would be needed have the corresponding standard deviation for FTIC, FMEAN, FMEDIAN to have a comprehensive statistical insight.
  • Also, an interesting idea is to keep only features which have at least two isotopic pattern peaks.
  • Moreover, regarding the awesome retention time cut-off feature, would it not be more efficient to have this implemented in the node "Detect LC-MS features" ?

LF

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