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lines changed Original file line number Diff line number Diff line change @@ -130,7 +130,7 @@ def run_reports(self, base_output_dir):
130130 np .seterr (all = 'raise' )
131131 self .create_output_dir (base_output_dir )
132132
133- df = pd . DataFrame ( {
133+ stats = {
134134 'false_negative_rate' : self .false_negative_rate (),
135135 'model_false_negative_rate' : self .model_false_negative_rate (),
136136 'mean_set_size' : self .mean_set_size (),
@@ -139,15 +139,16 @@ def run_reports(self, base_output_dir):
139139 'pct_singleton_or_duo_sets' : self .pct_singleton_or_duo_sets (),
140140 'pct_duo_plus_sets' : self .pct_duo_plus_sets (),
141141 'pct_trio_plus_sets' : self .pct_trio_plus_sets ()
142- }, index = [ 0 ])
142+ }
143143
144+ df = pd .DataFrame (stats , index = [0 ])
144145 df .T .to_csv (f'{ self .output_dir } /summary.csv' , header = False )
145-
146146 print (f'Reports saved to { self .output_dir } ' )
147147
148148 stats_dict = {
149149 'mean_set_sizes' : mean_set_sizes ,
150150 'mean_fnrs' : mean_fnrs ,
151- 'mean_model_fnrs' : mean_model_fnrs
151+ 'mean_model_fnrs' : mean_model_fnrs ,
152+ 'general_stats' : stats
152153 }
153154 return stats_dict
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