Add guidance against flippant appeals to obviousness #51
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| # Thin caller for the central Morrison-Lab/gha reusable Claude Code workflow. | |
| # Requires the CLAUDE_CODE_OAUTH_TOKEN repository secret. The calling job grants | |
| # write permissions so Claude (agent mode) can push branches and open PRs; | |
| # `secrets: inherit` passes CLAUDE_CODE_OAUTH_TOKEN through to the reusable | |
| # workflow. | |
| name: Claude Code | |
| on: | |
| issue_comment: | |
| types: [created] | |
| pull_request_review_comment: | |
| types: [created] | |
| issues: | |
| # `assigned` is intentionally NOT triggered: the reusable workflow's | |
| # trusted-author gate checks `github.event.issue.author_association`, | |
| # which describes the issue *author* — not the assigner. A collaborator | |
| # assigning themselves to an outsider's issue would fail the gate, so an | |
| # `assigned` event can't usefully grant access (it would only re-trigger | |
| # on every (re)assignment). Mention @claude in a comment instead. | |
| types: [opened] | |
| pull_request_review: | |
| types: [submitted] | |
| jobs: | |
| claude: | |
| # Caller-side gate: only invoke the reusable workflow when an @claude | |
| # mention is present, so unrelated events don't spawn a (skipped) run. The | |
| # reusable workflow still enforces the trusted-author gate. | |
| if: | | |
| (github.event_name == 'issue_comment' && contains(github.event.comment.body, '@claude')) || | |
| (github.event_name == 'pull_request_review_comment' && contains(github.event.comment.body, '@claude')) || | |
| (github.event_name == 'pull_request_review' && contains(github.event.review.body, '@claude')) || | |
| (github.event_name == 'issues' && (contains(github.event.issue.body, '@claude') || contains(github.event.issue.title, '@claude'))) | |
| permissions: | |
| contents: write | |
| pull-requests: write | |
| issues: write | |
| id-token: write | |
| actions: write # dispatch the review workflow via `gh workflow run` | |
| uses: Morrison-Lab/gha/.github/workflows/claude.yml@v1 | |
| secrets: inherit | |
| with: | |
| setup-r: false # psw is a Quarto book with no R package code | |
| install-quarto: true # so Claude can render the book to verify changes | |
| prompt-addendum: | | |
| This is the "Principles of Scientific Writing" Quarto book. The source | |
| is the top-level .qmd chapters listed in _quarto.yml; render with | |
| `quarto render` to verify changes. Follow the SERG lab manual's Quarto | |
| conventions: backticked `pkg::fn()` and Markdown links (no raw HTML) in | |
| .qmd, and US English spelling (add new terms to inst/WORDLIST). |