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.travis.yml

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@@ -49,6 +49,7 @@ jobs:
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allow_failures:
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- os: osx
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- dist: bionic
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- os: windows
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install:
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- conda env create -f environment.yml
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- source activate suite2p
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secure: 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on:
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tags: true
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condition: $CC = gcc

README.md

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@@ -41,7 +41,7 @@ Lectures on how suite2p works are available [here](https://youtu.be/HpL5XNtC5wU?
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Install an [Anaconda](https://www.anaconda.com/download/) distribution of Python -- Choose **Python 3.x** and your operating system. Note you might need to use an anaconda prompt if you did not add anaconda to the path.
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1. Download the [`environment.yml`](https://github.com/MouseLand/suite2p/blob/master/environment.yml) file from the repository. You can do this by cloning the repository, or copy-pasting the text from the file into a text document on your local computer.
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1. Download the [`environment.yml`](https://github.com/MouseLand/suite2p/blob/main/environment.yml) file from the repository. You can do this by cloning the repository, or copy-pasting the text from the file into a text document on your local computer.
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2. Open an anaconda prompt / command prompt with `conda` for **python 3** in the path
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3. Change directories to where the `environment.yml` is and run `conda env create -f environment.yml`
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4. Activate the environment with `conda activate suite2p`

environment.yml

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- pyqtgraph
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- importlib-metadata
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- paramiko
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- suite2p
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- pynwb
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- suite2p

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