-
Notifications
You must be signed in to change notification settings - Fork 265
Description
Issue with current documentation:
I am interested in implementing the registration tools within suite2p in some larger python analysis pipelines and I came across this documentation for calling registration functions:
https://suite2p.readthedocs.io/en/latest/registration.html#
This documentation appears to be out of date, and refers to some methods that are no longer in the registration module, e.g. registration.prepare_masks and registration.phasecorr.
The command line tool works great but ideally I would like to be able to use these registration functions directly within python code to compute registered image series and return ndarrays. Scanning the current version of the registration module I am just having some trouble understanding how to use these updated functions to replicate what the documentation originally demonstrated.
Idea or request for content:
Can you provide updated example code to call these registration functions from within Python code?