Merge branch 'main' into add-logo

Author: sayalaruano

requirements.txt

@@ -1,75 +1,75 @@
-anndata==0.12.0
-array-api-compat==1.12.0
-asttokens==3.0.0
-biom-format==2.1.16
-certifi==2025.7.14
-charset-normalizer==3.4.2
-click==8.2.1
-clustergrammer2==0.18.0
-combat==0.3.3
-comm==0.2.2
-contourpy==1.3.2
-crc32c==2.7.1
-cycler==0.12.1
-decorator==5.2.1
-donfig==0.8.1.post1
-executing==2.2.0
-fastcluster==1.3.0
-filelock==3.18.0
-fonttools==4.59.0
-fsspec==2025.7.0
-h5py==3.14.0
-idna==3.10
-inmoose==0.8.0
-ipython==9.4.0
-ipython_pygments_lexers==1.1.1
-ipywidgets==8.1.7
-jedi==0.19.2
-Jinja2==3.1.6
-joblib==1.5.1
-jupyterlab_widgets==3.0.15
-kiwisolver==1.4.8
-legacy-api-wrap==1.4.1
-MarkupSafe==3.0.2
-matplotlib==3.10.3
-matplotlib-inline==0.1.7
-mpmath==1.3.0
-narwhals==1.48.0
-natsort==8.4.0
-networkx==3.5
-numcodecs==0.16.1
-numpy==2.3.1
-packaging==25.0
-pandas==2.3.1
-parso==0.8.4
-patsy==1.0.1
-pexpect==4.9.0
-pillow==11.3.0
-plotly==6.2.0
-prompt_toolkit==3.0.51
-ptyprocess==0.7.0
-pure_eval==0.2.3
-Pygments==2.19.2
-pyparsing==3.2.3
-python-dateutil==2.9.0.post0
-pytz==2025.2
-PyYAML==6.0.2
-requests==2.32.4
-scikit-bio==0.7.0
-scikit-learn==1.7.1
-scipy==1.15.3
-seaborn==0.13.2
-six==1.17.0
-stack-data==0.6.3
-statsmodels==0.14.5
-sympy==1.14.0
-threadpoolctl==3.6.0
-torch==2.7.1
-tqdm==4.67.1
-traitlets==5.14.3
-typing_extensions==4.14.1
-tzdata==2025.2
-urllib3==2.5.0
-wcwidth==0.2.13
-widgetsnbextension==4.0.14
-zarr==3.1.0
+anndata
+array-api-compat
+asttokens
+biom-format
+certifi
+charset-normalizer
+click
+clustergrammer2
+combat
+comm
+contourpy
+crc32c
+cycler
+decorator
+donfig
+executing
+fastcluster
+filelock
+fonttools
+fsspec
+h5py
+idna
+inmoose
+ipython
+ipython_pygments_lexers
+ipywidgets
+jedi
+Jinja2
+joblib
+jupyterlab_widgets
+kiwisolver
+legacy-api-wrap
+MarkupSafe
+matplotlib
+matplotlib-inline
+mpmath
+narwhals
+natsort
+networkx
+numcodecs
+numpy
+packaging
+pandas
+parso
+patsy
+pexpect
+pillow
+plotly
+prompt_toolkit
+ptyprocess
+pure_eval
+Pygments
+pyparsing
+python-dateutil
+pytz
+PyYAML
+requests
+scikit-bio
+scikit-learn
+scipy
+seaborn
+six
+stack-data
+statsmodels
+sympy
+threadpoolctl
+torch
+tqdm
+traitlets
+typing_extensions
+tzdata
+urllib3
+wcwidth
+widgetsnbextension
+zarr