>>> vuegen -dir docs/example_data/Basic_example_vuegen_demo_notebook -output_dir tests/report_examples/Basic_example_vuegen_demo_notebook -rt html
...
An error occurred while executing the following cell:
------------------
with open('../docs/example_data/Basic_example_vuegen_demo_notebook/1_Plots/1_Interactive_plots/1_top_species_plot_by_biome_plotly.json', 'r') as plot_file:
plot_json = json.load(plot_file)
# Keep only 'data' and 'layout' sections
plot_json = {key: plot_json[key] for key in plot_json if key in ['data', 'layout']}
# Remove 'frame' section in 'data'
plot_json['data'] = [{k: v for k, v in entry.items() if k != 'frame'} for entry in plot_json.get('data', [])]
# Convert JSON to string
plot_json_str = json.dumps(plot_json)
# Create the plotly plot
fig_plotly = pio.from_json(plot_json_str)
fig_plotly.update_layout(autosize=False, width=950, height=400, margin=dict(b=50, t=50, l=50, r=50))
fig_plotly.show()
------------------
---------------------------------------------------------------------------
FileNotFoundError Traceback (most recent call last)
Cell In[2], line 1
----> 1 with open('../docs/example_data/Basic_example_vuegen_demo_notebook/1_Plots/1_Interactive_plots/1_top_species_plot_by_biome_plotly.json', 'r') as plot_file:
2 plot_json = json.load(plot_file)
4 # Keep only 'data' and 'layout' sections
File ~/miniforge3/envs/vuegen_py312/lib/python3.12/site-packages/IPython/core/interactiveshell.py:325, in _modified_open(file, *args, **kwargs)
318 if file in {0, 1, 2}:
319 raise ValueError(
320 f"IPython won't let you open fd={file} by default "
321 "as it is likely to crash IPython. If you know what you are doing, "
322 "you can use builtins' open."
323 )
--> 325 return io_open(file, *args, **kwargs)
FileNotFoundError: [Errno 2] No such file or directory: '../docs/example_data/Basic_example_vuegen_demo_notebook/1_Plots/1_Interactive_plots/1_top_species_plot_by_biome_plotly.json'
Traceback (most recent call last):
File "/Users/heweb/miniforge3/envs/vuegen_py312/bin/vuegen", line 8, in <module>
sys.exit(main())
^^^^^^
File "/Users/heweb/Documents/repos/vuegen/src/vuegen/__main__.py", line 42, in main
_, _ = report_generator.get_report(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/heweb/Documents/repos/vuegen/src/vuegen/report_generator.py", line 130, in get_report
quarto_report.run_report(output_dir=report_dir)
File "/Users/heweb/Documents/repos/vuegen/src/vuegen/quarto_reportview.py", line 289, in run_report
raise FileNotFoundError(f"Report file could not be created: {out_path}")
FileNotFoundError: Report file could not be created: tests/report_examples/Basic_example_vuegen_demo_notebook/quarto_report/quarto_report.html
