Merge pull request #59 from NBISweden/fix_resource_defaults

LucileSol · web-flow · commit 7c573452452b · 2021-06-14T14:02:29.000+02:00
Add default time for Uppmax processes
diff --git a/AbinitioTraining/config/compute_resources.config b/AbinitioTraining/config/compute_resources.config
@@ -1,5 +1,6 @@
 process {
     cpus = 1
+    time = '1h'
     maxForks = 20
     shell = ['/bin/bash', '-euo', 'pipefail']
     stageOutMode = 'rsync'
diff --git a/AnnotationPreprocessing/config/compute_resources.config b/AnnotationPreprocessing/config/compute_resources.config
@@ -1,5 +1,6 @@
 process {
     cpus = 1
+    time = '1h'
     maxForks = 20
     shell = ['/bin/bash', '-euo', 'pipefail']
     stageOutMode = 'rsync'
diff --git a/FunctionalAnnotation/config/compute_resources.config b/FunctionalAnnotation/config/compute_resources.config
@@ -1,5 +1,6 @@
 process {
     cpus = 1
+    time = '1h'
     maxForks = 20
     shell = ['/bin/bash', '-euo', 'pipefail']
     stageOutMode = 'rsync'
diff --git a/TranscriptAssembly/config/compute_resources.config b/TranscriptAssembly/config/compute_resources.config
@@ -1,5 +1,6 @@
 process {
     cpus = 1
+    time = '1h'
     maxForks = 20
     shell = ['/bin/bash', '-euo', 'pipefail']
     stageOutMode = 'rsync'
