@@ -14512,4 +14512,85 @@ resources:
1451214512 url:
1451314513 - https://zenodo.org/records/14996127
1451414514 - https://doi.org/10.5281/zenodo.14996127
14515-
14515+ - authors:
14516+ - Moore, Josh
14517+ - Sun, Yi
14518+ description: 'Slides for the NFDI Tech Talk live streamed to https://www.youtube.com/live/bzfmE29S270
14519+
14520+ See http://nfdi.de/talks for more information.'
14521+ license: cc-by-4.0
14522+ name: '[NFDI Tech Talk] Cloud Based Image Science'
14523+ num_downloads: 24
14524+ publication_date: '2025-06-02'
14525+ submission_date: '2025-06-03T11:21:25.871337'
14526+ url:
14527+ - https://zenodo.org/records/15575379
14528+ - https://doi.org/10.5281/zenodo.15575379
14529+ - authors:
14530+ - Schmidt, Christian
14531+ - Mathur, Aastha
14532+ - Moore, Josh
14533+ description: 'Presented at ELMI2025
14534+
14535+
14536+
14537+ https://www.embl.org/about/info/course-and-conference-office/events/elmi2025/'
14538+ license: cc-by-4.0
14539+ name: '[ELMI2025] Bridging communities with OME-Zarr'
14540+ num_downloads: 42
14541+ publication_date: '2025-06-04'
14542+ submission_date: '2025-06-03T11:21:26.272302'
14543+ url:
14544+ - https://zenodo.org/records/15393592
14545+ - https://doi.org/10.5281/zenodo.15393592
14546+ - authors:
14547+ - Moore, Josh
14548+ description: 'https://www.ebi.ac.uk/training/events/towards-open-and-standardised-imaging-data-introduction-bio-formats-ome-tiff-and-ome-zarr/
14549+
14550+ Microscopy and bioimaging technologies are fundamental tools for exploring biological
14551+ systems, generating large, multidimensional datasets rich in experimental detail.
14552+ However, the bioimaging community has historically faced major challenges around
14553+ data handling: vendor-specific proprietary formats, fragmented metadata storage,
14554+ and increasingly large dataset sizes that outstrip traditional storage and computing
14555+ solutions.
14556+
14557+ In this webinar, key open technologies developed by the Open Microscopy Environment
14558+ (OME) to address these challenges were presented. Specifically, the Bio-Formats
14559+ library for accessing diverse proprietary file formats, the OME-TIFF standard
14560+ for archival data storage, and the OME-Zarr format for cloud-native, scalable
14561+ bioimaging workflows were presented.'
14562+ license: cc-by-4.0
14563+ name: 'Towards open and standardised imaging data: an introduction to Bio-Formats,
14564+ OME-TIFF, and OME-Zarr'
14565+ num_downloads: 264
14566+ publication_date: '2025-05-28'
14567+ submission_date: '2025-06-03T11:21:26.733860'
14568+ url:
14569+ - https://zenodo.org/records/15479606
14570+ - https://doi.org/10.5281/zenodo.15479606
14571+ - authors:
14572+ - Bustos, Jonatan
14573+ description: This dataset contains 4 .nd2 image files of pollen grains captured
14574+ using a Nikon 80i microscope. The files include both the original full-frame images
14575+ and cropped Regions of Interest (ROIs) extracted from them. All images are in
14576+ RGB format and include multiple Z-stack layers.
14577+ license: cc-by-4.0
14578+ name: Nd2 does not open in Fiji Bio_formats 8.1.1 (additional files)
14579+ num_downloads: 11
14580+ publication_date: '2025-05-23'
14581+ submission_date: '2025-06-03T11:22:08.077083'
14582+ url:
14583+ - https://zenodo.org/records/15493140
14584+ - https://doi.org/10.5281/zenodo.15493140
14585+ - authors:
14586+ - Carlos, Jaramillo
14587+ description: this file is a .nd2 image of a pollen grain taken with a Nikon 80i.
14588+ It is in RGB and it is a stack of hundreds of Z layers
14589+ license: cc-by-4.0
14590+ name: Nd2 does not open in Fiji Bio_formats 8.1.1
14591+ num_downloads: 1
14592+ publication_date: '2025-06-02'
14593+ submission_date: '2025-06-03T11:22:15.103885'
14594+ url:
14595+ - https://zenodo.org/records/15579371
14596+ - https://doi.org/10.5281/zenodo.15579371
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