fix-the-autoannotate-metadata-workflow #77

	name: CheckMetadataSchema.yaml

	on:
	pull_request:
	paths:
	- 'Molecules/membrane/*/metadata.yaml'
	- 'Molecules/solution/*/metadata.yaml'

	jobs:
	validate:
	runs-on: ubuntu-latest
	env:
	FMDL_DATA_PATH: ${{ github.workspace }}/BilayerData

	steps:
	- name: Checkout BilayerData
	uses: actions/checkout@v6
	with:
	repository: ${{ github.event.pull_request.head.repo.full_name }}
	ref: ${{ github.event.pull_request.head.ref }}
	path: BilayerData

	- name: Checkout Databank
	uses: actions/checkout@v6
	with:
	repository: NMRlipids/FAIRMD_lipids
	ref: main
	path: Databank

	- name: Install Databank dependencies
	working-directory: Databank
	run: \|
	pip install .

	- name: Install check-jsonschema
	run: pip install check-jsonschema==0.34.1

	- name: Validate metadata.yaml files
	working-directory: BilayerData
	run: \|
	for file in Molecules/membrane//metadata.yaml Molecules/solution//metadata.yaml; do
	if [ -f "$file" ]; then
	check-jsonschema --schemafile ../Databank/src/fairmd/lipids/schema_validation/schema/metadata_schema.json "$file"
	fi
	done

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