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update readme
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tools/run-MDTF/README.md

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MDTF shell driver to assist model development at the GFDL <br />
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Command-line usage:
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```
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run-mdtf.sh /path/to/pp/dir/pp out_dir/mdtf startyr endyr
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run-mdtf.sh -i /path/to/pp/dir/pp -o out_dir/mdtf -s startyr -e endyr
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```
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This script requires a user inputted `pod_config.json`. One is supplied by default, but may need to be updated in order to launch more PODs or update realm information!
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A new one can be supplied with the `-l` OPTARG.

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