requirements.txt

adjustText==1.3.0
aiobotocore==3.2.0
aioitertools==0.13.0
anndata==0.12.10
annsel==0.1.2
array-api-compat==1.13.0
botocore==1.42.55
dask-image==2025.11.0
decoupler==2.1.4
Deprecated==1.3.1
docrep==0.3.2
donfig==0.8.1.post1
fast-array-utils==1.3.1
google-crc32c==1.8.0
h5py==3.15.1
inflect==7.5.0
jmespath==1.1.0
legacy-api-wrap==1.5
legendkit==0.3.6
marsilea==0.5.8
matplotlib-scalebar==0.9.0
more-itertools==10.8.0
multiscale_spatial_image==2.0.3
natsort==8.4.0
numcodecs==0.16.5
ome-zarr==0.13.0
omnipath==1.0.12
pathlib_abc==0.5.2
PIMS==0.7
pooch==1.9.0
pynndescent==0.6.0
rangehttpserver==1.4.0
rapids_singlecell==0.14.1
s3fs==2026.2.0
scanpy==1.12
scikit-misc==0.5.2
session-info2==0.4
slicerator==1.1.0
spatial_image==1.2.3
spatialdata==0.7.2
spatialdata-plot==0.2.14
squidpy==1.8.1
typeguard==4.5.1
umap-learn==0.5.11
universal_pathlib==0.3.10
validators==0.35.0