trying with contains

Signed-off-by: Peter St. John <pstjohn@nvidia.com>

Author: pstjohn

.github/workflows/bionemo-recipes.yml

@@ -20,11 +20,12 @@ concurrency:
   cancel-in-progress: true
 
 jobs:
-  changed-files:
+  changed-dirs:
     runs-on: ubuntu-latest
     outputs:
       any_changed: ${{ steps.changed-files.outputs.any_changed }}
       all_changed_files: ${{ steps.changed-files.outputs.all_changed_files }}
+      dirs: ${{ steps.set-dirs.outputs.dirs }}
 
     steps:
       - uses: actions/checkout@v4
@@ -42,60 +43,25 @@ jobs:
             models/**
             recipes/**
 
+      - id: set-dirs
+        run: |
+          DIRS=$(ls -d recipes/*/ models/*/ | jq -R -s -c 'split("\n")[:-1]')
+          echo "dirs=$DIRS" >> $GITHUB_OUTPUT
       - name: Show output
         run: |
           echo '${{ toJSON(steps.changed-files.outputs) }}'
         shell:
           bash
 
-  build-image:
-    needs:
-      - changed-files
-    runs-on: linux-amd64-cpu16
-    if: needs.changed-files.outputs.any_changed == 'true'
-    steps:
-      - name: Login to Docker Hub
-        uses: docker/login-action@v3
-        with:
-          username: ${{ vars.DOCKER_USERNAME }}
-          password: ${{ secrets.DOCKER_PASSWORD }}
-
-      - name: Checkout repository
-        uses: actions/checkout@v4
-        with:
-          submodules: "recursive"
-
-      - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@v3
-
-      - name: Docker Metadata
-        id: metadata
-        uses: docker/metadata-action@v5
-        with:
-          images: svcbionemo023/bionemo-framework
-          tags: |
-            type=schedule
-            type=ref,event=branch
-            type=ref,event=tag
-            type=ref,event=pr
-            type=raw,value=${{ github.run_id }}
-
-      # This action sets up our cache-from and cache-to flags appropriately; see the README of this action for more
-      # info. It doesn't seem to cache correctly for merge_group events, so we need to add that as an extra argument in
-      # the step below. There's probably a slight optimization to be had here by caching from the pr- caches for
-      # merge_group events. See https://github.com/int128/docker-build-cache-config-action/issues/1005 for more info.
-      - uses: int128/docker-build-cache-config-action@v1
-        id: cache
-        with:
-          image: svcbionemo023/bionemo-build-cache
+  per-folder-test:
+    needs: changed-dirs
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        dir: ${{ fromJson(needs.changed-dirs.outputs.dirs) }}
 
-      - name: Build and push
-        uses: docker/build-push-action@v5
-        with:
-          push: true
-          tags: ${{ steps.metadata.outputs.tags }}
-          labels: ${{ steps.metadata.outputs.labels }}
-          cache-from: |
-            ${{ steps.cache.outputs.cache-from }}
-            type=registry,ref=svcbionemo023/bionemo-build-cache:main
-          cache-to: ${{ steps.cache.outputs.cache-to }}
+    steps:
+      - name: Run tests
+        if: contains(needs.changed-dirs.outputs.all_changed_files, matrix.dir)
+        run: |
+          echo "Running tests for ${{ matrix.dir }}"