Merge pull request #8 from aanil/master

The command is run outside the qc_ngi dir

Author: sofiahag

multiqc_ngi/multiqc_ngi.py

@@ -232,7 +232,7 @@ def get_ngi_project_metadata(self, pid):
 
         config.title = '{}: {}'.format(pid, p_summary['project_name'])
         config.project_name = p_summary['project_name']
-        if config.analysis_dir and ('qc_ngi' in config.analysis_dir[0] or 'qc_ngi' in os.getcwd()):
+        if config.analysis_dir and ('qc_ngi' in config.analysis_dir[0] or 'qc_ngi' in os.listdir()):
             infix = 'qc'
         else:
             infix = 'pipeline'